RNA–Protein interactions for RNA: ENST00000514202.1

CMBL-207, Transcript of carboxymethylenebutenolidase homolog, humanhuman

TSL 2

Gene CMBL, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-207ENST00000514202 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
CMBL-207ENST00000514202 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
CMBL-207ENST00000514202 ABCC9O60706 1549 aa26.7■■□□□ 1.87
CMBL-207ENST00000514202 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
CMBL-207ENST00000514202 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
CMBL-207ENST00000514202 NACADO15069 1562 aa25.85■■□□□ 1.73
CMBL-207ENST00000514202 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
CMBL-207ENST00000514202 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
CMBL-207ENST00000514202 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
CMBL-207ENST00000514202 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
CMBL-207ENST00000514202 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
CMBL-207ENST00000514202 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
CMBL-207ENST00000514202 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
CMBL-207ENST00000514202 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
CMBL-207ENST00000514202 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
CMBL-207ENST00000514202 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
CMBL-207ENST00000514202 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
CMBL-207ENST00000514202 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
CMBL-207ENST00000514202 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
CMBL-207ENST00000514202 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
CMBL-207ENST00000514202 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
CMBL-207ENST00000514202 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
CMBL-207ENST00000514202 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
CMBL-207ENST00000514202 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
CMBL-207ENST00000514202 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
CMBL-207ENST00000514202 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
CMBL-207ENST00000514202 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
CMBL-207ENST00000514202 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
CMBL-207ENST00000514202 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
CMBL-207ENST00000514202 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
CMBL-207ENST00000514202 WIZO95785 1651 aa23.48■■□□□ 1.35
CMBL-207ENST00000514202 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
CMBL-207ENST00000514202 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
CMBL-207ENST00000514202 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
CMBL-207ENST00000514202 NESP48681 1621 aa23.1■■□□□ 1.29
CMBL-207ENST00000514202 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
CMBL-207ENST00000514202 CFTRP13569 1480 aa23.07■■□□□ 1.28
CMBL-207ENST00000514202 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
CMBL-207ENST00000514202 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
CMBL-207ENST00000514202 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
CMBL-207ENST00000514202 CUX2O14529 1486 aa22.94■■□□□ 1.26
CMBL-207ENST00000514202 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
CMBL-207ENST00000514202 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
CMBL-207ENST00000514202 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
CMBL-207ENST00000514202 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
CMBL-207ENST00000514202 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
CMBL-207ENST00000514202 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
CMBL-207ENST00000514202 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
CMBL-207ENST00000514202 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
CMBL-207ENST00000514202 WDR62O43379 1518 aa22.66■■□□□ 1.22
CMBL-207ENST00000514202 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
CMBL-207ENST00000514202 URB2Q14146 1524 aaKnown RBP22.58■■□□□ 1.21
CMBL-207ENST00000514202 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
CMBL-207ENST00000514202 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
CMBL-207ENST00000514202 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
CMBL-207ENST00000514202 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
CMBL-207ENST00000514202 CUX1P39880 1505 aa22.33■■□□□ 1.17
CMBL-207ENST00000514202 POLA1P09884 1462 aaPredicted RBP22.29■■□□□ 1.16
CMBL-207ENST00000514202 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
CMBL-207ENST00000514202 SOGA1O94964 1423 aa22.24■■□□□ 1.15
CMBL-207ENST00000514202 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
CMBL-207ENST00000514202 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
CMBL-207ENST00000514202 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
CMBL-207ENST00000514202 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
CMBL-207ENST00000514202 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
CMBL-207ENST00000514202 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
CMBL-207ENST00000514202 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
CMBL-207ENST00000514202 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
CMBL-207ENST00000514202 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
CMBL-207ENST00000514202 AQRO60306 1485 aaKnown RBP eCLIP22.07■■□□□ 1.127e-8■■■□□ 18.8
CMBL-207ENST00000514202 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
CMBL-207ENST00000514202 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
CMBL-207ENST00000514202 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
CMBL-207ENST00000514202 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
CMBL-207ENST00000514202 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
CMBL-207ENST00000514202 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
CMBL-207ENST00000514202 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
CMBL-207ENST00000514202 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
CMBL-207ENST00000514202 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
CMBL-207ENST00000514202 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
CMBL-207ENST00000514202 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
CMBL-207ENST00000514202 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
CMBL-207ENST00000514202 IGF1RP08069 1367 aa21.79■■□□□ 1.08
CMBL-207ENST00000514202 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
CMBL-207ENST00000514202 FHAD1B1AJZ9 1412 aa21.75■■□□□ 1.07
CMBL-207ENST00000514202 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
CMBL-207ENST00000514202 CHD1O14646 1710 aa21.73■■□□□ 1.07
CMBL-207ENST00000514202 FBLN2P98095 1184 aa21.7■■□□□ 1.06
CMBL-207ENST00000514202 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
CMBL-207ENST00000514202 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
CMBL-207ENST00000514202 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
CMBL-207ENST00000514202 ADAMTS12P58397 1594 aa21.66■■□□□ 1.06
CMBL-207ENST00000514202 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
CMBL-207ENST00000514202 NUP160Q12769 1436 aa21.62■■□□□ 1.05
CMBL-207ENST00000514202 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
CMBL-207ENST00000514202 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
CMBL-207ENST00000514202 CLASP1Q7Z460 1538 aa21.58■■□□□ 1.04
CMBL-207ENST00000514202 CUL7Q14999 1698 aa21.57■■□□□ 1.04
CMBL-207ENST00000514202 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
CMBL-207ENST00000514202 EEA1Q15075 1411 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms