RNA–Protein interactions for RNA: ENST00000561795.5

ACSM3-206, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-206ENST00000561795 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
ACSM3-206ENST00000561795 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
ACSM3-206ENST00000561795 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
ACSM3-206ENST00000561795 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
ACSM3-206ENST00000561795 FOXD1Q16676 465 aa17.92■□□□□ 0.46
ACSM3-206ENST00000561795 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
ACSM3-206ENST00000561795 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
ACSM3-206ENST00000561795 ADRA2BP18089 450 aa16.93■□□□□ 0.3
ACSM3-206ENST00000561795 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
ACSM3-206ENST00000561795 MSH5O43196 834 aa16.63■□□□□ 0.25
ACSM3-206ENST00000561795 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
ACSM3-206ENST00000561795 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
ACSM3-206ENST00000561795 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
ACSM3-206ENST00000561795 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
ACSM3-206ENST00000561795 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
ACSM3-206ENST00000561795 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
ACSM3-206ENST00000561795 HOXD11P31277 338 aaPredicted RBP14.82□□□□□ -0.04
ACSM3-206ENST00000561795 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
ACSM3-206ENST00000561795 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
ACSM3-206ENST00000561795 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
ACSM3-206ENST00000561795 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
ACSM3-206ENST00000561795 KCNA4P22459 653 aa14.61□□□□□ -0.07
ACSM3-206ENST00000561795 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
ACSM3-206ENST00000561795 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
ACSM3-206ENST00000561795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.141e-11■□□□□ 8.2
ACSM3-206ENST00000561795 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
ACSM3-206ENST00000561795 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.17
ACSM3-206ENST00000561795 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
ACSM3-206ENST00000561795 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
ACSM3-206ENST00000561795 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
ACSM3-206ENST00000561795 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
ACSM3-206ENST00000561795 CAPN15O75808 1086 aa13.58□□□□□ -0.24
ACSM3-206ENST00000561795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
ACSM3-206ENST00000561795 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
ACSM3-206ENST00000561795 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
ACSM3-206ENST00000561795 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
ACSM3-206ENST00000561795 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
ACSM3-206ENST00000561795 APLP2Q06481 763 aa13.47□□□□□ -0.25
ACSM3-206ENST00000561795 ZBTB22O15209 634 aa13.45□□□□□ -0.26
ACSM3-206ENST00000561795 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
ACSM3-206ENST00000561795 DSG3P32926 999 aa13.42□□□□□ -0.26
ACSM3-206ENST00000561795 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
ACSM3-206ENST00000561795 ABCB7O75027 752 aa13.3□□□□□ -0.28
ACSM3-206ENST00000561795 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
ACSM3-206ENST00000561795 POLA2Q14181 598 aa13.11□□□□□ -0.31
ACSM3-206ENST00000561795 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
ACSM3-206ENST00000561795 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
ACSM3-206ENST00000561795 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
ACSM3-206ENST00000561795 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
ACSM3-206ENST00000561795 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
ACSM3-206ENST00000561795 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
ACSM3-206ENST00000561795 FBLN2P98095 1184 aa12.65□□□□□ -0.38
ACSM3-206ENST00000561795 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
ACSM3-206ENST00000561795 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
ACSM3-206ENST00000561795 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
ACSM3-206ENST00000561795 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
ACSM3-206ENST00000561795 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
ACSM3-206ENST00000561795 POTEHQ6S545 545 aa12.45□□□□□ -0.42
ACSM3-206ENST00000561795 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
ACSM3-206ENST00000561795 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
ACSM3-206ENST00000561795 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
ACSM3-206ENST00000561795 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
ACSM3-206ENST00000561795 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
ACSM3-206ENST00000561795 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
ACSM3-206ENST00000561795 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
ACSM3-206ENST00000561795 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
ACSM3-206ENST00000561795 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
ACSM3-206ENST00000561795 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
ACSM3-206ENST00000561795 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
ACSM3-206ENST00000561795 PRR29P0C7W0 189 aa12□□□□□ -0.49
ACSM3-206ENST00000561795 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
ACSM3-206ENST00000561795 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
ACSM3-206ENST00000561795 HAX1O00165 279 aa11.89□□□□□ -0.51
ACSM3-206ENST00000561795 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
ACSM3-206ENST00000561795 PROM2Q8N271 834 aa11.87□□□□□ -0.51
ACSM3-206ENST00000561795 FKBP8Q14318 412 aa11.82□□□□□ -0.52
ACSM3-206ENST00000561795 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
ACSM3-206ENST00000561795 EVX2Q03828 476 aa11.78□□□□□ -0.52
ACSM3-206ENST00000561795 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
ACSM3-206ENST00000561795 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
ACSM3-206ENST00000561795 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
ACSM3-206ENST00000561795 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
ACSM3-206ENST00000561795 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
ACSM3-206ENST00000561795 MIER1Q8N108 512 aa11.55□□□□□ -0.56
ACSM3-206ENST00000561795 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
ACSM3-206ENST00000561795 GABBR2O75899 941 aa11.51□□□□□ -0.57
ACSM3-206ENST00000561795 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
ACSM3-206ENST00000561795 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
ACSM3-206ENST00000561795 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
ACSM3-206ENST00000561795 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
ACSM3-206ENST00000561795 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
ACSM3-206ENST00000561795 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
ACSM3-206ENST00000561795 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
ACSM3-206ENST00000561795 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
ACSM3-206ENST00000561795 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
ACSM3-206ENST00000561795 CLCN6P51797 869 aa11.35□□□□□ -0.59
ACSM3-206ENST00000561795 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
ACSM3-206ENST00000561795 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
ACSM3-206ENST00000561795 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
ACSM3-206ENST00000561795 NUBP1P53384 320 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms