RNA–Protein interactions for RNA: ENST00000547476.5

TUBA1B-203, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-203ENST00000547476 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
TUBA1B-203ENST00000547476 ABCC9O60706 1549 aa27.82■■■□□ 2.04
TUBA1B-203ENST00000547476 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
TUBA1B-203ENST00000547476 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
TUBA1B-203ENST00000547476 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
TUBA1B-203ENST00000547476 NACADO15069 1562 aa25.86■■□□□ 1.73
TUBA1B-203ENST00000547476 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
TUBA1B-203ENST00000547476 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
TUBA1B-203ENST00000547476 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
TUBA1B-203ENST00000547476 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
TUBA1B-203ENST00000547476 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
TUBA1B-203ENST00000547476 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
TUBA1B-203ENST00000547476 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
TUBA1B-203ENST00000547476 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
TUBA1B-203ENST00000547476 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
TUBA1B-203ENST00000547476 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
TUBA1B-203ENST00000547476 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
TUBA1B-203ENST00000547476 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
TUBA1B-203ENST00000547476 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
TUBA1B-203ENST00000547476 CUX2O14529 1486 aa24.22■■□□□ 1.47
TUBA1B-203ENST00000547476 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
TUBA1B-203ENST00000547476 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
TUBA1B-203ENST00000547476 NESP48681 1621 aa23.72■■□□□ 1.39
TUBA1B-203ENST00000547476 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
TUBA1B-203ENST00000547476 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
TUBA1B-203ENST00000547476 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
TUBA1B-203ENST00000547476 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
TUBA1B-203ENST00000547476 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
TUBA1B-203ENST00000547476 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
TUBA1B-203ENST00000547476 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
TUBA1B-203ENST00000547476 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
TUBA1B-203ENST00000547476 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
TUBA1B-203ENST00000547476 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
TUBA1B-203ENST00000547476 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
TUBA1B-203ENST00000547476 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
TUBA1B-203ENST00000547476 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
TUBA1B-203ENST00000547476 WDR62O43379 1518 aa23.14■■□□□ 1.3
TUBA1B-203ENST00000547476 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
TUBA1B-203ENST00000547476 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
TUBA1B-203ENST00000547476 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
TUBA1B-203ENST00000547476 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
TUBA1B-203ENST00000547476 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
TUBA1B-203ENST00000547476 WIZO95785 1651 aa22.84■■□□□ 1.25
TUBA1B-203ENST00000547476 RIMBP3CA6NJZ7 1639 aa22.8■■□□□ 1.24
TUBA1B-203ENST00000547476 RIMBP3BA6NNM3 1639 aa22.8■■□□□ 1.24
TUBA1B-203ENST00000547476 RIMBP3Q9UFD9 1639 aa22.8■■□□□ 1.24
TUBA1B-203ENST00000547476 CFTRP13569 1480 aa22.73■■□□□ 1.23
TUBA1B-203ENST00000547476 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
TUBA1B-203ENST00000547476 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
TUBA1B-203ENST00000547476 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
TUBA1B-203ENST00000547476 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
TUBA1B-203ENST00000547476 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
TUBA1B-203ENST00000547476 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
TUBA1B-203ENST00000547476 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
TUBA1B-203ENST00000547476 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
TUBA1B-203ENST00000547476 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
TUBA1B-203ENST00000547476 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
TUBA1B-203ENST00000547476 CHD1O14646 1710 aa22.38■■□□□ 1.17
TUBA1B-203ENST00000547476 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
TUBA1B-203ENST00000547476 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
TUBA1B-203ENST00000547476 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
TUBA1B-203ENST00000547476 FBLN2P98095 1184 aa22.28■■□□□ 1.16
TUBA1B-203ENST00000547476 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
TUBA1B-203ENST00000547476 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.167e-12■■■■■ 29.7
TUBA1B-203ENST00000547476 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
TUBA1B-203ENST00000547476 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
TUBA1B-203ENST00000547476 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
TUBA1B-203ENST00000547476 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
TUBA1B-203ENST00000547476 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
TUBA1B-203ENST00000547476 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
TUBA1B-203ENST00000547476 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
TUBA1B-203ENST00000547476 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
TUBA1B-203ENST00000547476 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
TUBA1B-203ENST00000547476 SOGA1O94964 1423 aa21.99■■□□□ 1.11
TUBA1B-203ENST00000547476 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
TUBA1B-203ENST00000547476 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
TUBA1B-203ENST00000547476 MAGI1Q96QZ7 1491 aaPredicted RBP21.94■■□□□ 1.1
TUBA1B-203ENST00000547476 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.09
TUBA1B-203ENST00000547476 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
TUBA1B-203ENST00000547476 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
TUBA1B-203ENST00000547476 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
TUBA1B-203ENST00000547476 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
TUBA1B-203ENST00000547476 CUX1P39880 1505 aa21.76■■□□□ 1.07
TUBA1B-203ENST00000547476 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
TUBA1B-203ENST00000547476 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
TUBA1B-203ENST00000547476 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
TUBA1B-203ENST00000547476 KIF13AQ9H1H9 1805 aa21.6■■□□□ 1.05
TUBA1B-203ENST00000547476 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
TUBA1B-203ENST00000547476 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
TUBA1B-203ENST00000547476 NUP160Q12769 1436 aa21.53■■□□□ 1.04
TUBA1B-203ENST00000547476 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
TUBA1B-203ENST00000547476 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
TUBA1B-203ENST00000547476 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
TUBA1B-203ENST00000547476 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
TUBA1B-203ENST00000547476 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
TUBA1B-203ENST00000547476 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.01
TUBA1B-203ENST00000547476 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
TUBA1B-203ENST00000547476 ILDR1Q86SU0 546 aaPredicted RBP21.35■■□□□ 1.01
TUBA1B-203ENST00000547476 KDM6BO15054 1643 aa21.34■■□□□ 1.01
TUBA1B-203ENST00000547476 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms