RNA–Protein interactions for RNA: ENST00000430709.1

ITGAV-203, Transcript of integrin subunit alpha V, humanhuman

TSL 5

Gene ITGAV, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-203ENST00000430709 AEBP2Q6ZN18 517 aaPredicted RBP30.28■■■□□ 2.44
ITGAV-203ENST00000430709 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
ITGAV-203ENST00000430709 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
ITGAV-203ENST00000430709 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
ITGAV-203ENST00000430709 FOXD1Q16676 465 aa24.11■■□□□ 1.45
ITGAV-203ENST00000430709 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
ITGAV-203ENST00000430709 MSH5O43196 834 aa22.67■■□□□ 1.22
ITGAV-203ENST00000430709 PIAS4Q8N2W9 510 aaPredicted RBP22.53■■□□□ 1.2
ITGAV-203ENST00000430709 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
ITGAV-203ENST00000430709 ADRA2BP18089 450 aa22.37■■□□□ 1.17
ITGAV-203ENST00000430709 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
ITGAV-203ENST00000430709 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
ITGAV-203ENST00000430709 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
ITGAV-203ENST00000430709 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
ITGAV-203ENST00000430709 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
ITGAV-203ENST00000430709 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
ITGAV-203ENST00000430709 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
ITGAV-203ENST00000430709 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
ITGAV-203ENST00000430709 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
ITGAV-203ENST00000430709 CACNB1Q02641 598 aaPredicted RBP19.45■□□□□ 0.7
ITGAV-203ENST00000430709 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
ITGAV-203ENST00000430709 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
ITGAV-203ENST00000430709 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
ITGAV-203ENST00000430709 C1QBPQ07021 282 aaKnown RBP19.05■□□□□ 0.64
ITGAV-203ENST00000430709 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
ITGAV-203ENST00000430709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
ITGAV-203ENST00000430709 KCNA4P22459 653 aa18.53■□□□□ 0.56
ITGAV-203ENST00000430709 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
ITGAV-203ENST00000430709 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
ITGAV-203ENST00000430709 CAPN15O75808 1086 aa18.11■□□□□ 0.49
ITGAV-203ENST00000430709 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
ITGAV-203ENST00000430709 DSG3P32926 999 aa18.04■□□□□ 0.48
ITGAV-203ENST00000430709 APLP2Q06481 763 aa17.96■□□□□ 0.47
ITGAV-203ENST00000430709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
ITGAV-203ENST00000430709 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
ITGAV-203ENST00000430709 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
ITGAV-203ENST00000430709 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
ITGAV-203ENST00000430709 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
ITGAV-203ENST00000430709 ABCB7O75027 752 aa17.64■□□□□ 0.41
ITGAV-203ENST00000430709 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
ITGAV-203ENST00000430709 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
ITGAV-203ENST00000430709 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
ITGAV-203ENST00000430709 POTEHQ6S545 545 aa17.39■□□□□ 0.37
ITGAV-203ENST00000430709 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
ITGAV-203ENST00000430709 POLA2Q14181 598 aa17.3■□□□□ 0.36
ITGAV-203ENST00000430709 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
ITGAV-203ENST00000430709 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
ITGAV-203ENST00000430709 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
ITGAV-203ENST00000430709 ZBTB22O15209 634 aa17.01■□□□□ 0.31
ITGAV-203ENST00000430709 ATXN8OSP0DMR3 200 aa16.89■□□□□ 0.29
ITGAV-203ENST00000430709 CHRDL2Q6WN34 429 aa16.88■□□□□ 0.29
ITGAV-203ENST00000430709 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
ITGAV-203ENST00000430709 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
ITGAV-203ENST00000430709 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
ITGAV-203ENST00000430709 FBLN2P98095 1184 aa16.54■□□□□ 0.24
ITGAV-203ENST00000430709 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
ITGAV-203ENST00000430709 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
ITGAV-203ENST00000430709 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
ITGAV-203ENST00000430709 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
ITGAV-203ENST00000430709 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
ITGAV-203ENST00000430709 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
ITGAV-203ENST00000430709 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
ITGAV-203ENST00000430709 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
ITGAV-203ENST00000430709 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
ITGAV-203ENST00000430709 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
ITGAV-203ENST00000430709 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
ITGAV-203ENST00000430709 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
ITGAV-203ENST00000430709 ABCC9O60706 1549 aa16.16■□□□□ 0.18
ITGAV-203ENST00000430709 HAX1O00165 279 aa16.16■□□□□ 0.18
ITGAV-203ENST00000430709 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
ITGAV-203ENST00000430709 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
ITGAV-203ENST00000430709 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
ITGAV-203ENST00000430709 EVX2Q03828 476 aa15.91■□□□□ 0.14
ITGAV-203ENST00000430709 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
ITGAV-203ENST00000430709 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ITGAV-203ENST00000430709 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
ITGAV-203ENST00000430709 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
ITGAV-203ENST00000430709 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
ITGAV-203ENST00000430709 GABBR2O75899 941 aa15.6■□□□□ 0.09
ITGAV-203ENST00000430709 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
ITGAV-203ENST00000430709 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
ITGAV-203ENST00000430709 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
ITGAV-203ENST00000430709 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
ITGAV-203ENST00000430709 CLCN6P51797 869 aa15.45■□□□□ 0.06
ITGAV-203ENST00000430709 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
ITGAV-203ENST00000430709 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
ITGAV-203ENST00000430709 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
ITGAV-203ENST00000430709 LHX8Q68G74 356 aa15.26■□□□□ 0.03
ITGAV-203ENST00000430709 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
ITGAV-203ENST00000430709 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
ITGAV-203ENST00000430709 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
ITGAV-203ENST00000430709 PROM2Q8N271 834 aa15.21■□□□□ 0.03
ITGAV-203ENST00000430709 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
ITGAV-203ENST00000430709 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
ITGAV-203ENST00000430709 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
ITGAV-203ENST00000430709 NACADO15069 1562 aa15.11■□□□□ 0.01
ITGAV-203ENST00000430709 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
ITGAV-203ENST00000430709 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
ITGAV-203ENST00000430709 PHF12Q96QT6 1004 aa15.04■□□□□ -0
ITGAV-203ENST00000430709 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms