RNA–Protein interactions for RNA: ENST00000437086.5

MMP11-204, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 2,071 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-204ENST00000437086 NISCHQ9Y2I1 1504 aa41.68■■■■■ 4.26
MMP11-204ENST00000437086 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
MMP11-204ENST00000437086 ZCCHC6Q5VYS8 1495 aaKnown RBP35.13■■■■□ 3.21
MMP11-204ENST00000437086 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
MMP11-204ENST00000437086 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
MMP11-204ENST00000437086 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
MMP11-204ENST00000437086 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
MMP11-204ENST00000437086 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
MMP11-204ENST00000437086 ABCC9O60706 1549 aa33.6■■■□□ 2.97
MMP11-204ENST00000437086 NACADO15069 1562 aa33.44■■■□□ 2.94
MMP11-204ENST00000437086 SCRIBQ14160 1630 aa33.34■■■□□ 2.93
MMP11-204ENST00000437086 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
MMP11-204ENST00000437086 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
MMP11-204ENST00000437086 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
MMP11-204ENST00000437086 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
MMP11-204ENST00000437086 CECR2Q9BXF3 1484 aa32.34■■■□□ 2.77
MMP11-204ENST00000437086 MROH2BQ7Z745 1585 aa32.23■■■□□ 2.75
MMP11-204ENST00000437086 BAZ1AQ9NRL2 1556 aaPredicted RBP32.18■■■□□ 2.74
MMP11-204ENST00000437086 WIZO95785 1651 aa32.05■■■□□ 2.72
MMP11-204ENST00000437086 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
MMP11-204ENST00000437086 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
MMP11-204ENST00000437086 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
MMP11-204ENST00000437086 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
MMP11-204ENST00000437086 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
MMP11-204ENST00000437086 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
MMP11-204ENST00000437086 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
MMP11-204ENST00000437086 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
MMP11-204ENST00000437086 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
MMP11-204ENST00000437086 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
MMP11-204ENST00000437086 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
MMP11-204ENST00000437086 BAZ1BQ9UIG0 1483 aaKnown RBP31.17■■■□□ 2.58
MMP11-204ENST00000437086 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
MMP11-204ENST00000437086 ABCC8Q09428 1581 aa31■■■□□ 2.55
MMP11-204ENST00000437086 HMGXB3Q12766 1538 aa30.86■■■□□ 2.53
MMP11-204ENST00000437086 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
MMP11-204ENST00000437086 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
MMP11-204ENST00000437086 EHMT2Q96KQ7 1210 aa30.69■■■□□ 2.5
MMP11-204ENST00000437086 EEA1Q15075 1411 aa30.64■■■□□ 2.5
MMP11-204ENST00000437086 PCGF6Q9BYE7 350 aa30.63■■■□□ 2.49
MMP11-204ENST00000437086 SYNJ1O43426 1573 aa30.53■■■□□ 2.48
MMP11-204ENST00000437086 SOGA1O94964 1423 aa30.52■■■□□ 2.48
MMP11-204ENST00000437086 TRIM26Q12899 539 aaPredicted RBP30.44■■■□□ 2.46
MMP11-204ENST00000437086 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
MMP11-204ENST00000437086 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.46
MMP11-204ENST00000437086 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
MMP11-204ENST00000437086 RUSC2Q8N2Y8 1516 aa30.35■■■□□ 2.45
MMP11-204ENST00000437086 CFTRP13569 1480 aa30.33■■■□□ 2.45
MMP11-204ENST00000437086 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
MMP11-204ENST00000437086 PRDM2Q13029 1718 aa30.28■■■□□ 2.44
MMP11-204ENST00000437086 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
MMP11-204ENST00000437086 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
MMP11-204ENST00000437086 HRCP23327 699 aa30.23■■■□□ 2.43
MMP11-204ENST00000437086 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
MMP11-204ENST00000437086 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.42
MMP11-204ENST00000437086 KIF21BO75037 1637 aa30.18■■■□□ 2.42
MMP11-204ENST00000437086 CEP162Q5TB80 1403 aa30.17■■■□□ 2.42
MMP11-204ENST00000437086 CADPSQ9ULU8 1353 aa30.13■■■□□ 2.41
MMP11-204ENST00000437086 CUX1P39880 1505 aa30.1■■■□□ 2.41
MMP11-204ENST00000437086 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
MMP11-204ENST00000437086 RAPGEF2Q9Y4G8 1499 aa29.88■■■□□ 2.37
MMP11-204ENST00000437086 PPARGC1BQ86YN6 1023 aaKnown RBP29.85■■■□□ 2.37
MMP11-204ENST00000437086 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
MMP11-204ENST00000437086 FANCD2Q9BXW9 1451 aa29.83■■■□□ 2.37
MMP11-204ENST00000437086 CLIP1P30622 1438 aa29.81■■■□□ 2.36
MMP11-204ENST00000437086 PRXQ9BXM0 1461 aa29.78■■■□□ 2.36
MMP11-204ENST00000437086 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
MMP11-204ENST00000437086 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
MMP11-204ENST00000437086 CUX2O14529 1486 aa29.69■■■□□ 2.34
MMP11-204ENST00000437086 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
MMP11-204ENST00000437086 NESP48681 1621 aa29.66■■■□□ 2.34
MMP11-204ENST00000437086 ZEB1P37275 1124 aaPredicted RBP29.63■■■□□ 2.33
MMP11-204ENST00000437086 VPS8Q8N3P4 1428 aa29.61■■■□□ 2.33
MMP11-204ENST00000437086 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
MMP11-204ENST00000437086 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
MMP11-204ENST00000437086 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
MMP11-204ENST00000437086 APLP2Q06481 763 aa29.54■■■□□ 2.32
MMP11-204ENST00000437086 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
MMP11-204ENST00000437086 IGF1RP08069 1367 aa29.49■■■□□ 2.31
MMP11-204ENST00000437086 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
MMP11-204ENST00000437086 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
MMP11-204ENST00000437086 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
MMP11-204ENST00000437086 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
MMP11-204ENST00000437086 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
MMP11-204ENST00000437086 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
MMP11-204ENST00000437086 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
MMP11-204ENST00000437086 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
MMP11-204ENST00000437086 CUL7Q14999 1698 aa29.28■■■□□ 2.28
MMP11-204ENST00000437086 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
MMP11-204ENST00000437086 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
MMP11-204ENST00000437086 CCER1Q8TC90 406 aaPredicted RBP29.21■■■□□ 2.27
MMP11-204ENST00000437086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.16■■■□□ 2.26
MMP11-204ENST00000437086 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
MMP11-204ENST00000437086 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
MMP11-204ENST00000437086 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
MMP11-204ENST00000437086 CTTNBP2Q8WZ74 1663 aa29.07■■■□□ 2.24
MMP11-204ENST00000437086 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
MMP11-204ENST00000437086 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.24
MMP11-204ENST00000437086 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
MMP11-204ENST00000437086 EFCAB5A4FU69 1503 aa29■■■□□ 2.23
MMP11-204ENST00000437086 HNRNPUL2Q1KMD3 747 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms