RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
PARP1-209ENST00000498787 CCDC180Q9P1Z9 1646 aa28.48■■■□□ 2.15
PARP1-209ENST00000498787 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
PARP1-209ENST00000498787 DCAF1Q9Y4B6 1507 aa27.11■■□□□ 1.93
PARP1-209ENST00000498787 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
PARP1-209ENST00000498787 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
PARP1-209ENST00000498787 ABCC9O60706 1549 aa26.8■■□□□ 1.88
PARP1-209ENST00000498787 NACADO15069 1562 aa26.59■■□□□ 1.85
PARP1-209ENST00000498787 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
PARP1-209ENST00000498787 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
PARP1-209ENST00000498787 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
PARP1-209ENST00000498787 SUPT5HO00267 1087 aaKnown RBP25.61■■□□□ 1.69
PARP1-209ENST00000498787 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
PARP1-209ENST00000498787 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
PARP1-209ENST00000498787 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
PARP1-209ENST00000498787 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
PARP1-209ENST00000498787 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
PARP1-209ENST00000498787 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
PARP1-209ENST00000498787 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
PARP1-209ENST00000498787 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
PARP1-209ENST00000498787 WIZO95785 1651 aa24.88■■□□□ 1.57
PARP1-209ENST00000498787 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
PARP1-209ENST00000498787 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
PARP1-209ENST00000498787 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
PARP1-209ENST00000498787 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
PARP1-209ENST00000498787 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
PARP1-209ENST00000498787 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
PARP1-209ENST00000498787 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
PARP1-209ENST00000498787 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
PARP1-209ENST00000498787 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
PARP1-209ENST00000498787 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
PARP1-209ENST00000498787 CC2D2AQ9P2K1 1620 aa24.26■■□□□ 1.47
PARP1-209ENST00000498787 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
PARP1-209ENST00000498787 CFTRP13569 1480 aa23.96■■□□□ 1.43
PARP1-209ENST00000498787 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
PARP1-209ENST00000498787 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
PARP1-209ENST00000498787 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
PARP1-209ENST00000498787 EEA1Q15075 1411 aa23.72■■□□□ 1.39
PARP1-209ENST00000498787 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
PARP1-209ENST00000498787 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
PARP1-209ENST00000498787 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
PARP1-209ENST00000498787 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
PARP1-209ENST00000498787 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
PARP1-209ENST00000498787 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
PARP1-209ENST00000498787 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
PARP1-209ENST00000498787 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
PARP1-209ENST00000498787 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
PARP1-209ENST00000498787 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
PARP1-209ENST00000498787 CUX1P39880 1505 aa23.51■■□□□ 1.35
PARP1-209ENST00000498787 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
PARP1-209ENST00000498787 SOGA1O94964 1423 aa23.48■■□□□ 1.35
PARP1-209ENST00000498787 NESP48681 1621 aa23.48■■□□□ 1.35
PARP1-209ENST00000498787 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
PARP1-209ENST00000498787 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
PARP1-209ENST00000498787 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
PARP1-209ENST00000498787 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
PARP1-209ENST00000498787 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
PARP1-209ENST00000498787 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
PARP1-209ENST00000498787 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
PARP1-209ENST00000498787 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
PARP1-209ENST00000498787 KIF21BO75037 1637 aa23.22■■□□□ 1.31
PARP1-209ENST00000498787 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
PARP1-209ENST00000498787 CUX2O14529 1486 aa23.19■■□□□ 1.3
PARP1-209ENST00000498787 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
PARP1-209ENST00000498787 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
PARP1-209ENST00000498787 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
PARP1-209ENST00000498787 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
PARP1-209ENST00000498787 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
PARP1-209ENST00000498787 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
PARP1-209ENST00000498787 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
PARP1-209ENST00000498787 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
PARP1-209ENST00000498787 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
PARP1-209ENST00000498787 IGF1RP08069 1367 aa23.07■■□□□ 1.28
PARP1-209ENST00000498787 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
PARP1-209ENST00000498787 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
PARP1-209ENST00000498787 WDR62O43379 1518 aa23.02■■□□□ 1.28
PARP1-209ENST00000498787 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
PARP1-209ENST00000498787 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
PARP1-209ENST00000498787 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
PARP1-209ENST00000498787 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
PARP1-209ENST00000498787 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
PARP1-209ENST00000498787 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
PARP1-209ENST00000498787 CUL7Q14999 1698 aa22.89■■□□□ 1.25
PARP1-209ENST00000498787 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
PARP1-209ENST00000498787 CLIP1P30622 1438 aa22.88■■□□□ 1.25
PARP1-209ENST00000498787 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
PARP1-209ENST00000498787 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
PARP1-209ENST00000498787 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
PARP1-209ENST00000498787 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
PARP1-209ENST00000498787 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.234e-7■■□□□ 12
PARP1-209ENST00000498787 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
PARP1-209ENST00000498787 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
PARP1-209ENST00000498787 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
PARP1-209ENST00000498787 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
PARP1-209ENST00000498787 APLP2Q06481 763 aa22.63■■□□□ 1.21
PARP1-209ENST00000498787 RANGAP1P46060 587 aaPredicted RBP22.61■■□□□ 1.21
PARP1-209ENST00000498787 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
PARP1-209ENST00000498787 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
PARP1-209ENST00000498787 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
PARP1-209ENST00000498787 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms