RNA–Protein interactions for RNA: ENST00000506821.1

CMBL-204, Transcript of carboxymethylenebutenolidase homolog, humanhuman

TSL 2

Gene CMBL, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-204ENST00000506821 NISCHQ9Y2I1 1504 aa30.48■■■□□ 2.47
CMBL-204ENST00000506821 ABCC9O60706 1549 aa27.54■■■□□ 2
CMBL-204ENST00000506821 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
CMBL-204ENST00000506821 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
CMBL-204ENST00000506821 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
CMBL-204ENST00000506821 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
CMBL-204ENST00000506821 NACADO15069 1562 aa25.9■■□□□ 1.74
CMBL-204ENST00000506821 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
CMBL-204ENST00000506821 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
CMBL-204ENST00000506821 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
CMBL-204ENST00000506821 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
CMBL-204ENST00000506821 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
CMBL-204ENST00000506821 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
CMBL-204ENST00000506821 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
CMBL-204ENST00000506821 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
CMBL-204ENST00000506821 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CMBL-204ENST00000506821 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
CMBL-204ENST00000506821 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
CMBL-204ENST00000506821 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
CMBL-204ENST00000506821 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
CMBL-204ENST00000506821 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
CMBL-204ENST00000506821 ERCC6Q03468 1493 aa23.8■■□□□ 1.4
CMBL-204ENST00000506821 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
CMBL-204ENST00000506821 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
CMBL-204ENST00000506821 CUX2O14529 1486 aa23.72■■□□□ 1.39
CMBL-204ENST00000506821 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
CMBL-204ENST00000506821 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
CMBL-204ENST00000506821 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
CMBL-204ENST00000506821 NESP48681 1621 aa23.61■■□□□ 1.37
CMBL-204ENST00000506821 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
CMBL-204ENST00000506821 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
CMBL-204ENST00000506821 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
CMBL-204ENST00000506821 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
CMBL-204ENST00000506821 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
CMBL-204ENST00000506821 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
CMBL-204ENST00000506821 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
CMBL-204ENST00000506821 WIZO95785 1651 aa23.19■■□□□ 1.3
CMBL-204ENST00000506821 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
CMBL-204ENST00000506821 WDR62O43379 1518 aa23■■□□□ 1.27
CMBL-204ENST00000506821 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
CMBL-204ENST00000506821 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
CMBL-204ENST00000506821 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
CMBL-204ENST00000506821 CFTRP13569 1480 aa22.92■■□□□ 1.26
CMBL-204ENST00000506821 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
CMBL-204ENST00000506821 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
CMBL-204ENST00000506821 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
CMBL-204ENST00000506821 OSCARQ8IYS5 282 aa22.7■■□□□ 1.22
CMBL-204ENST00000506821 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
CMBL-204ENST00000506821 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
CMBL-204ENST00000506821 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
CMBL-204ENST00000506821 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.19
CMBL-204ENST00000506821 TOPBP1Q92547 1522 aa22.5■■□□□ 1.19
CMBL-204ENST00000506821 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
CMBL-204ENST00000506821 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.18
CMBL-204ENST00000506821 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
CMBL-204ENST00000506821 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
CMBL-204ENST00000506821 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
CMBL-204ENST00000506821 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
CMBL-204ENST00000506821 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.165e-8■■■□□ 19.1
CMBL-204ENST00000506821 FBLN2P98095 1184 aa22.28■■□□□ 1.16
CMBL-204ENST00000506821 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
CMBL-204ENST00000506821 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.16
CMBL-204ENST00000506821 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
CMBL-204ENST00000506821 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
CMBL-204ENST00000506821 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
CMBL-204ENST00000506821 SOGA1O94964 1423 aa22.21■■□□□ 1.15
CMBL-204ENST00000506821 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
CMBL-204ENST00000506821 CHD1O14646 1710 aa22.16■■□□□ 1.14
CMBL-204ENST00000506821 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
CMBL-204ENST00000506821 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.12
CMBL-204ENST00000506821 CUX1P39880 1505 aa22.07■■□□□ 1.12
CMBL-204ENST00000506821 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
CMBL-204ENST00000506821 ARAP1Q96P48 1450 aa22.04■■□□□ 1.12
CMBL-204ENST00000506821 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
CMBL-204ENST00000506821 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
CMBL-204ENST00000506821 WDR97A6NE52 1622 aa22.02■■□□□ 1.11
CMBL-204ENST00000506821 GRIN2BQ13224 1484 aa22■■□□□ 1.11
CMBL-204ENST00000506821 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
CMBL-204ENST00000506821 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
CMBL-204ENST00000506821 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
CMBL-204ENST00000506821 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CMBL-204ENST00000506821 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
CMBL-204ENST00000506821 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
CMBL-204ENST00000506821 PBRM1Q86U86 1689 aa21.83■■□□□ 1.09
CMBL-204ENST00000506821 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
CMBL-204ENST00000506821 ABCA5Q8WWZ7 1642 aa21.79■■□□□ 1.08
CMBL-204ENST00000506821 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
CMBL-204ENST00000506821 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
CMBL-204ENST00000506821 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
CMBL-204ENST00000506821 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
CMBL-204ENST00000506821 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
CMBL-204ENST00000506821 NUP160Q12769 1436 aa21.62■■□□□ 1.05
CMBL-204ENST00000506821 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
CMBL-204ENST00000506821 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
CMBL-204ENST00000506821 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
CMBL-204ENST00000506821 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
CMBL-204ENST00000506821 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
CMBL-204ENST00000506821 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
CMBL-204ENST00000506821 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
CMBL-204ENST00000506821 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1429 ms