RNA–Protein interactions for RNA: ENST00000587785.1

PVR-206, Transcript of poliovirus receptor, humanhuman

TSL 3

Gene PVR, Length 356 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVR-206ENST00000587785 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
PVR-206ENST00000587785 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
PVR-206ENST00000587785 ABCC9O60706 1549 aa22.48■■□□□ 1.19
PVR-206ENST00000587785 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
PVR-206ENST00000587785 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
PVR-206ENST00000587785 NACADO15069 1562 aa21.41■■□□□ 1.02
PVR-206ENST00000587785 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
PVR-206ENST00000587785 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
PVR-206ENST00000587785 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
PVR-206ENST00000587785 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
PVR-206ENST00000587785 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
PVR-206ENST00000587785 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
PVR-206ENST00000587785 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
PVR-206ENST00000587785 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
PVR-206ENST00000587785 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
PVR-206ENST00000587785 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
PVR-206ENST00000587785 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
PVR-206ENST00000587785 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
PVR-206ENST00000587785 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
PVR-206ENST00000587785 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
PVR-206ENST00000587785 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
PVR-206ENST00000587785 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
PVR-206ENST00000587785 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
PVR-206ENST00000587785 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
PVR-206ENST00000587785 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
PVR-206ENST00000587785 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
PVR-206ENST00000587785 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
PVR-206ENST00000587785 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
PVR-206ENST00000587785 BAZ1BQ9UIG0 1483 aaKnown RBP19.53■□□□□ 0.72
PVR-206ENST00000587785 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
PVR-206ENST00000587785 WIZO95785 1651 aa19.38■□□□□ 0.69
PVR-206ENST00000587785 NESP48681 1621 aa19.36■□□□□ 0.69
PVR-206ENST00000587785 CUX2O14529 1486 aa19.33■□□□□ 0.68
PVR-206ENST00000587785 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
PVR-206ENST00000587785 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
PVR-206ENST00000587785 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
PVR-206ENST00000587785 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
PVR-206ENST00000587785 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
PVR-206ENST00000587785 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
PVR-206ENST00000587785 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
PVR-206ENST00000587785 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
PVR-206ENST00000587785 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
PVR-206ENST00000587785 CFTRP13569 1480 aa18.95■□□□□ 0.62
PVR-206ENST00000587785 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
PVR-206ENST00000587785 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
PVR-206ENST00000587785 WDR62O43379 1518 aa18.93■□□□□ 0.62
PVR-206ENST00000587785 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
PVR-206ENST00000587785 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
PVR-206ENST00000587785 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
PVR-206ENST00000587785 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
PVR-206ENST00000587785 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
PVR-206ENST00000587785 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
PVR-206ENST00000587785 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
PVR-206ENST00000587785 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
PVR-206ENST00000587785 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
PVR-206ENST00000587785 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
PVR-206ENST00000587785 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
PVR-206ENST00000587785 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
PVR-206ENST00000587785 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
PVR-206ENST00000587785 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
PVR-206ENST00000587785 CUX1P39880 1505 aa18.37■□□□□ 0.53
PVR-206ENST00000587785 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.537e-8■■■■■ 38.3
PVR-206ENST00000587785 SOGA1O94964 1423 aa18.33■□□□□ 0.53
PVR-206ENST00000587785 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
PVR-206ENST00000587785 CHD1O14646 1710 aa18.32■□□□□ 0.52
PVR-206ENST00000587785 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
PVR-206ENST00000587785 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
PVR-206ENST00000587785 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
PVR-206ENST00000587785 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
PVR-206ENST00000587785 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
PVR-206ENST00000587785 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
PVR-206ENST00000587785 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
PVR-206ENST00000587785 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
PVR-206ENST00000587785 FBLN2P98095 1184 aa18.22■□□□□ 0.51
PVR-206ENST00000587785 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
PVR-206ENST00000587785 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
PVR-206ENST00000587785 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
PVR-206ENST00000587785 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
PVR-206ENST00000587785 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
PVR-206ENST00000587785 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
PVR-206ENST00000587785 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
PVR-206ENST00000587785 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
PVR-206ENST00000587785 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
PVR-206ENST00000587785 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
PVR-206ENST00000587785 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
PVR-206ENST00000587785 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
PVR-206ENST00000587785 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
PVR-206ENST00000587785 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
PVR-206ENST00000587785 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
PVR-206ENST00000587785 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
PVR-206ENST00000587785 IGF1RP08069 1367 aa17.99■□□□□ 0.47
PVR-206ENST00000587785 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
PVR-206ENST00000587785 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
PVR-206ENST00000587785 EEA1Q15075 1411 aa17.97■□□□□ 0.47
PVR-206ENST00000587785 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
PVR-206ENST00000587785 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
PVR-206ENST00000587785 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
PVR-206ENST00000587785 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
PVR-206ENST00000587785 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
PVR-206ENST00000587785 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms