Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 AC009533.2-201ENST00000543664 586 ntBASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC6AQ8NDV7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 FAM197Y3-203ENST00000618346 717 ntBASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AL691403.2-201ENST00000618460 490 ntBASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AL356309.3-201ENST00000624132 1934 ntBASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 TNXA-203ENST00000507684 2038 ntBASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AC023274.1-201ENST00000418278 595 ntBASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TNRC6AQ8NDV7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 MYLKP1-201ENST00000509077 1580 ntBASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.48■□□□□ 0.23
TNRC6AQ8NDV7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC6AQ8NDV7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC6AQ8NDV7 DNAJB3-202ENST00000449667 1266 ntBASIC16.47■□□□□ 0.23
TNRC6AQ8NDV7 AC112698.1-201ENST00000510299 916 ntBASIC16.47■□□□□ 0.23
TNRC6AQ8NDV7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC6AQ8NDV7 AC011467.2-201ENST00000598425 242 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms