Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 HLA-L-209ENST00000420110 1011 ntBASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 KRT16P2-201ENST00000414673 1423 ntBASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM88Q6PEY1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 TERF1P5-201ENST00000477545 1207 ntBASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 AC013268.1-206ENST00000638368 961 ntBASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 AC112229.1-201ENST00000639295 961 ntBASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM88Q6PEY1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM88Q6PEY1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 LINC02228-204ENST00000642115 2962 ntBASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM88Q6PEY1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms