Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.56■□□□□ 0.56
MT-ND3P03897 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.56■□□□□ 0.56
MT-ND3P03897 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND3P03897 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MT-ND3P03897 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.55■□□□□ 0.56
MT-ND3P03897 FLJ13224-201ENST00000313737 1514 ntBASIC18.55■□□□□ 0.56
MT-ND3P03897 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.55■□□□□ 0.56
MT-ND3P03897 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.55■□□□□ 0.56
MT-ND3P03897 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.55■□□□□ 0.56
MT-ND3P03897 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.55■□□□□ 0.56
MT-ND3P03897 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.55■□□□□ 0.56
MT-ND3P03897 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND3P03897 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.55■□□□□ 0.56
MT-ND3P03897 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MT-ND3P03897 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.54■□□□□ 0.56
MT-ND3P03897 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MT-ND3P03897 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.54■□□□□ 0.56
MT-ND3P03897 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MT-ND3P03897 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.54■□□□□ 0.56
MT-ND3P03897 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND3P03897 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND3P03897 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-ND3P03897 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
MT-ND3P03897 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-ND3P03897 C2orf69P3-201ENST00000565542 1120 ntBASIC18.53■□□□□ 0.56
MT-ND3P03897 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND3P03897 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND3P03897 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND3P03897 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms