Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 AC008556.1-201ENST00000610908 2040 ntBASIC18.23■□□□□ 0.51
CCDC189A1A4V9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 BCL2-203ENST00000589955 5011 ntBASIC18.23■□□□□ 0.51
CCDC189A1A4V9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 AL023284.2-201ENST00000405850 579 ntBASIC18.23■□□□□ 0.51
CCDC189A1A4V9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 AP005242.2-201ENST00000580065 1175 ntBASIC18.23■□□□□ 0.51
CCDC189A1A4V9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC189A1A4V9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 PRORSD1P-201ENST00000295112 541 ntBASIC18.22■□□□□ 0.51
CCDC189A1A4V9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 AC142381.4-202ENST00000563973 229 ntBASIC18.22■□□□□ 0.51
CCDC189A1A4V9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 AC008622.2-201ENST00000617006 1229 ntBASIC18.22■□□□□ 0.51
CCDC189A1A4V9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 KRT8P7-201ENST00000533003 1432 ntBASIC18.22■□□□□ 0.51
CCDC189A1A4V9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC189A1A4V9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 GCSHP5-201ENST00000443090 522 ntBASIC18.21■□□□□ 0.51
CCDC189A1A4V9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms