RNA–Protein interactions for RNA: ENST00000414154.6

SMIM19-201, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-201ENST00000414154 NISCHQ9Y2I1 1504 aa48.66■■■■■ 5.38
SMIM19-201ENST00000414154 CCDC180Q9P1Z9 1646 aa43.36■■■■■ 4.53
SMIM19-201ENST00000414154 ABCC9O60706 1549 aa43.11■■■■■ 4.49
SMIM19-201ENST00000414154 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
SMIM19-201ENST00000414154 DCAF8L2P0C7V8 631 aa40.97■■■■■ 4.15
SMIM19-201ENST00000414154 NACADO15069 1562 aa40.92■■■■■ 4.14
SMIM19-201ENST00000414154 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
SMIM19-201ENST00000414154 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
SMIM19-201ENST00000414154 PABPN1Q86U42 306 aaKnown RBP eCLIP40.29■■■■■ 4.04
SMIM19-201ENST00000414154 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
SMIM19-201ENST00000414154 DNAJC5BQ9UF47 199 aa40.24■■■■■ 4.03
SMIM19-201ENST00000414154 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
SMIM19-201ENST00000414154 BICRAQ9NZM4 1560 aa40.03■■■■■ 4
SMIM19-201ENST00000414154 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
SMIM19-201ENST00000414154 SHROOM4Q9ULL8 1493 aa39.29■■■■□ 3.88
SMIM19-201ENST00000414154 CC2D2AQ9P2K1 1620 aa38.93■■■■□ 3.82
SMIM19-201ENST00000414154 EIF4G1Q04637 1599 aaKnown RBP38.93■■■■□ 3.82
SMIM19-201ENST00000414154 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
SMIM19-201ENST00000414154 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
SMIM19-201ENST00000414154 SMARCA4P51532 1647 aa37.84■■■■□ 3.65
SMIM19-201ENST00000414154 ATAD2BQ9ULI0 1458 aa37.81■■■■□ 3.64
SMIM19-201ENST00000414154 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
SMIM19-201ENST00000414154 SMARCA2P51531 1590 aa37.63■■■■□ 3.61
SMIM19-201ENST00000414154 MROH2BQ7Z745 1585 aa37.57■■■■□ 3.6
SMIM19-201ENST00000414154 HMGXB3Q12766 1538 aa37.52■■■■□ 3.6
SMIM19-201ENST00000414154 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.59
SMIM19-201ENST00000414154 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
SMIM19-201ENST00000414154 NESP48681 1621 aa37.21■■■■□ 3.55
SMIM19-201ENST00000414154 WIZO95785 1651 aa37.12■■■■□ 3.53
SMIM19-201ENST00000414154 ERCC6Q03468 1493 aa37.07■■■■□ 3.53
SMIM19-201ENST00000414154 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
SMIM19-201ENST00000414154 CUX2O14529 1486 aa36.85■■■■□ 3.49
SMIM19-201ENST00000414154 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
SMIM19-201ENST00000414154 CADPSQ9ULU8 1353 aa36.72■■■■□ 3.47
SMIM19-201ENST00000414154 KIF21AQ7Z4S6 1674 aa36.66■■■■□ 3.46
SMIM19-201ENST00000414154 THOC2Q8NI27 1593 aaKnown RBP36.64■■■■□ 3.46
SMIM19-201ENST00000414154 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
SMIM19-201ENST00000414154 TOP2AP11388 1531 aaKnown RBP36.59■■■■□ 3.45
SMIM19-201ENST00000414154 DNAJC5Q9H3Z4 198 aa36.49■■■■□ 3.43
SMIM19-201ENST00000414154 CFTRP13569 1480 aa36.38■■■■□ 3.41
SMIM19-201ENST00000414154 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
SMIM19-201ENST00000414154 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
SMIM19-201ENST00000414154 CCDC88BA6NC98 1476 aa36.27■■■■□ 3.4
SMIM19-201ENST00000414154 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
SMIM19-201ENST00000414154 WDR62O43379 1518 aa36.21■■■■□ 3.39
SMIM19-201ENST00000414154 URB2Q14146 1524 aaKnown RBP36.02■■■■□ 3.36
SMIM19-201ENST00000414154 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
SMIM19-201ENST00000414154 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
SMIM19-201ENST00000414154 TOPBP1Q92547 1522 aa35.66■■■■□ 3.3
SMIM19-201ENST00000414154 ZNF608Q9ULD9 1512 aaPredicted RBP35.53■■■■□ 3.28
SMIM19-201ENST00000414154 DNMBPQ6XZF7 1577 aa35.51■■■■□ 3.28
SMIM19-201ENST00000414154 ABCC8Q09428 1581 aa35.51■■■■□ 3.27
SMIM19-201ENST00000414154 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
SMIM19-201ENST00000414154 TARBP1Q13395 1621 aaKnown RBP35.33■■■■□ 3.25
SMIM19-201ENST00000414154 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
SMIM19-201ENST00000414154 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
SMIM19-201ENST00000414154 AQRO60306 1485 aaKnown RBP eCLIP35.26■■■■□ 3.23
SMIM19-201ENST00000414154 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.23
SMIM19-201ENST00000414154 CUX1P39880 1505 aa35.25■■■■□ 3.23
SMIM19-201ENST00000414154 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
SMIM19-201ENST00000414154 SOGA1O94964 1423 aa35.18■■■■□ 3.22
SMIM19-201ENST00000414154 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
SMIM19-201ENST00000414154 TDRD9Q8NDG6 1382 aaKnown RBP35.11■■■■□ 3.21
SMIM19-201ENST00000414154 TRIM41Q8WV44 630 aa35.06■■■■□ 3.2
SMIM19-201ENST00000414154 CHD1O14646 1710 aa34.94■■■■□ 3.18
SMIM19-201ENST00000414154 FBLN2P98095 1184 aa34.9■■■■□ 3.18
SMIM19-201ENST00000414154 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
SMIM19-201ENST00000414154 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
SMIM19-201ENST00000414154 RIMBP3CA6NJZ7 1639 aa34.82■■■■□ 3.16
SMIM19-201ENST00000414154 RIMBP3BA6NNM3 1639 aa34.82■■■■□ 3.16
SMIM19-201ENST00000414154 RIMBP3Q9UFD9 1639 aa34.82■■■■□ 3.16
SMIM19-201ENST00000414154 GRIN2BQ13224 1484 aa34.78■■■■□ 3.16
SMIM19-201ENST00000414154 ABCA10Q8WWZ4 1543 aa34.77■■■■□ 3.16
SMIM19-201ENST00000414154 SYNJ1O43426 1573 aa34.76■■■■□ 3.16
SMIM19-201ENST00000414154 WRNQ14191 1432 aaPredicted RBP eCLIP34.76■■■■□ 3.16
SMIM19-201ENST00000414154 GAPVD1Q14C86 1478 aa34.74■■■■□ 3.15
SMIM19-201ENST00000414154 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
SMIM19-201ENST00000414154 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
SMIM19-201ENST00000414154 BIVM-ERCC5R4GMW8 1640 aa34.73■■■■□ 3.15
SMIM19-201ENST00000414154 MAGI1Q96QZ7 1491 aaPredicted RBP34.7■■■■□ 3.15
SMIM19-201ENST00000414154 CHMP7Q8WUX9 453 aaPredicted RBP34.68■■■■□ 3.14
SMIM19-201ENST00000414154 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
SMIM19-201ENST00000414154 PBRM1Q86U86 1689 aa34.67■■■■□ 3.14
SMIM19-201ENST00000414154 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
SMIM19-201ENST00000414154 CLASP1Q7Z460 1538 aa34.55■■■■□ 3.12
SMIM19-201ENST00000414154 CYB5RLQ6IPT4 315 aa34.53■■■■□ 3.12
SMIM19-201ENST00000414154 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
SMIM19-201ENST00000414154 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
SMIM19-201ENST00000414154 GRIN2AQ12879 1464 aa34.34■■■■□ 3.09
SMIM19-201ENST00000414154 ERICH3Q5RHP9 1530 aa34.3■■■■□ 3.08
SMIM19-201ENST00000414154 FHAD1B1AJZ9 1412 aa34.3■■■■□ 3.08
SMIM19-201ENST00000414154 CEP170Q5SW79 1584 aa34.24■■■■□ 3.07
SMIM19-201ENST00000414154 NUP160Q12769 1436 aa34.23■■■■□ 3.07
SMIM19-201ENST00000414154 ERCC6L2Q5T890 1561 aa34.15■■■■□ 3.06
SMIM19-201ENST00000414154 IGF1RP08069 1367 aa34.1■■■■□ 3.05
SMIM19-201ENST00000414154 KIF27Q86VH2 1401 aa34.04■■■■□ 3.04
SMIM19-201ENST00000414154 SHROOM2Q13796 1616 aa34.01■■■■□ 3.04
SMIM19-201ENST00000414154 TRHP20396 242 aaPredicted RBP33.95■■■■□ 3.03
SMIM19-201ENST00000414154 JPH4Q96JJ6 628 aa33.94■■■■□ 3.02
SMIM19-201ENST00000414154 PRG4Q92954 1404 aaPredicted RBP33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms