Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SELENOP-208ENST00000510965 787 ntTSL 512.31□□□□□ -0.449e-30■□□□□ 10
SND1Q7KZF4 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.449e-30■□□□□ 10
SND1Q7KZF4 SELENOP-201ENST00000505309 573 ntTSL 211.53□□□□□ -0.569e-30■□□□□ 10
SND1Q7KZF4 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.599e-30■□□□□ 10
SND1Q7KZF4 SELENOP-215ENST00000515626 566 ntTSL 410.6□□□□□ -0.719e-30■□□□□ 10
SND1Q7KZF4 SELENOP-206ENST00000509276 738 ntTSL 59.92□□□□□ -0.829e-30■□□□□ 10
SND1Q7KZF4 SELENOP-202ENST00000506078 799 ntTSL 29.3□□□□□ -0.929e-30■□□□□ 10
SND1Q7KZF4 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -19e-30■□□□□ 10
SND1Q7KZF4 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.46□□□□□ -1.069e-30■□□□□ 10
SND1Q7KZF4 SELENOP-205ENST00000508937 606 ntTSL 28.46□□□□□ -1.069e-30■□□□□ 10
SND1Q7KZF4 SELENOP-210ENST00000512980 4175 ntTSL 27.63□□□□□ -1.199e-30■□□□□ 10
SND1Q7KZF4 SELENOP-212ENST00000514218 1047 ntTSL 57.5□□□□□ -1.219e-30■□□□□ 10
SND1Q7KZF4 SELENOP-207ENST00000510650 580 ntTSL 35.61□□□□□ -1.519e-30■□□□□ 10
SND1Q7KZF4 TRAM1-203ENST00000520700 542 ntTSL 518.1■□□□□ 0.497e-8■□□□□ 10
SND1Q7KZF4 PSMA5-204ENST00000490870 1667 ntTSL 1 (best)10.69□□□□□ -0.73e-7■□□□□ 9.9
SND1Q7KZF4 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.48□□□□□ -0.893e-7■□□□□ 9.9
SND1Q7KZF4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.773e-7■□□□□ 9.9
SND1Q7KZF4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.546e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.69■■□□□ 1.546e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24■■□□□ 1.436e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-203ENST00000495706 1859 ntTSL 323.85■■□□□ 1.416e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.23■□□□□ 0.836e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.756e-8■□□□□ 9.9
SND1Q7KZF4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.92□□□□□ -0.026e-8■□□□□ 9.9
SND1Q7KZF4 COL18A1-207ENST00000473212 2515 ntTSL 223.42■■□□□ 1.344e-14■□□□□ 9.9
SND1Q7KZF4 RAN-206ENST00000535090 657 ntTSL 56.11□□□□□ -1.438e-14■□□□□ 9.9
SND1Q7KZF4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.633e-8■□□□□ 9.9
SND1Q7KZF4 SREBF2-203ENST00000435061 770 ntTSL 317.77■□□□□ 0.444e-9■□□□□ 9.9
SND1Q7KZF4 MMP11-210ENST00000488363 549 ntTSL 218.68■□□□□ 0.584e-8■□□□□ 9.9
SND1Q7KZF4 MMP11-203ENST00000434318 1165 ntTSL 514.21□□□□□ -0.134e-8■□□□□ 9.9
SND1Q7KZF4 MMP11-209ENST00000480185 370 ntTSL 213.8□□□□□ -0.24e-8■□□□□ 9.9
SND1Q7KZF4 LBR-204ENST00000424022 478 ntTSL 39.92□□□□□ -0.822e-7■□□□□ 9.9
SND1Q7KZF4 ACP2-202ENST00000444355 640 ntTSL 213.67□□□□□ -0.222e-7■□□□□ 9.9
SND1Q7KZF4 ACP2-209ENST00000530453 826 ntTSL 2 BASIC11.97□□□□□ -0.492e-7■□□□□ 9.9
SND1Q7KZF4 CYP2W1-204ENST00000462453 566 ntTSL 417.12■□□□□ 0.334e-9■□□□□ 9.9
SND1Q7KZF4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.172e-10■□□□□ 9.9
SND1Q7KZF4 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.421e-9■□□□□ 9.9
SND1Q7KZF4 SERPINF2-204ENST00000453066 842 ntTSL 517.92■□□□□ 0.469e-21■□□□□ 9.9
SND1Q7KZF4 COPE-208ENST00000598969 1770 ntTSL 521.71■■□□□ 1.075e-9■□□□□ 9.9
SND1Q7KZF4 COPE-204ENST00000593827 601 ntTSL 320.81■□□□□ 0.925e-9■□□□□ 9.9
SND1Q7KZF4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.11■□□□□ 0.655e-9■□□□□ 9.9
SND1Q7KZF4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.645e-9■□□□□ 9.9
SND1Q7KZF4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.13■□□□□ 0.495e-9■□□□□ 9.9
SND1Q7KZF4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.32■□□□□ 0.25e-9■□□□□ 9.9
SND1Q7KZF4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.63□□□□□ -0.074e-7■□□□□ 9.9
SND1Q7KZF4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.42■□□□□ 0.545e-7■□□□□ 9.9
SND1Q7KZF4 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC14.04□□□□□ -0.165e-7■□□□□ 9.9
SND1Q7KZF4 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.425e-7■□□□□ 9.9
SND1Q7KZF4 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC11.56□□□□□ -0.565e-7■□□□□ 9.9
SND1Q7KZF4 HADHB-207ENST00000494615 2883 ntTSL 28.44□□□□□ -1.065e-7■□□□□ 9.9
SND1Q7KZF4 MDH1-213ENST00000485781 893 ntTSL 211.98□□□□□ -0.494e-12■□□□□ 9.9
SND1Q7KZF4 MDH1-210ENST00000472098 936 ntTSL 1 (best)11.3□□□□□ -0.64e-12■□□□□ 9.9
SND1Q7KZF4 MDH1-208ENST00000454035 575 ntTSL 37.39□□□□□ -1.234e-12■□□□□ 9.9
SND1Q7KZF4 MDH1-207ENST00000442225 785 ntTSL 56.39□□□□□ -1.394e-12■□□□□ 9.9
SND1Q7KZF4 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC11.37□□□□□ -0.592e-12■□□□□ 9.9
SND1Q7KZF4 TFR2-211ENST00000475011 610 ntTSL 218.41■□□□□ 0.542e-6■□□□□ 9.9
SND1Q7KZF4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.244e-7■□□□□ 9.8
SND1Q7KZF4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.294e-7■□□□□ 9.8
SND1Q7KZF4 PRPF8-207ENST00000573681 1044 ntTSL 213.42□□□□□ -0.264e-7■□□□□ 9.8
SND1Q7KZF4 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.764e-7■□□□□ 9.8
SND1Q7KZF4 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.784e-7■□□□□ 9.8
SND1Q7KZF4 GSPT1-208ENST00000565267 1864 ntTSL 59.96□□□□□ -0.824e-7■□□□□ 9.8
SND1Q7KZF4 PRPF8-204ENST00000572445 648 ntTSL 28.48□□□□□ -1.054e-7■□□□□ 9.8
SND1Q7KZF4 PRPF8-209ENST00000573725 749 ntTSL 56.97□□□□□ -1.294e-7■□□□□ 9.8
SND1Q7KZF4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.81■■□□□ 1.43e-15■□□□□ 9.8
SND1Q7KZF4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.43e-15■□□□□ 9.8
SND1Q7KZF4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.57■■□□□ 1.043e-15■□□□□ 9.8
SND1Q7KZF4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.575e-20■□□□□ 9.8
SND1Q7KZF4 SELENOS-204ENST00000527833 856 ntTSL 217.5■□□□□ 0.393e-6■□□□□ 9.8
SND1Q7KZF4 YIF1A-209ENST00000494836 540 ntTSL 216.86■□□□□ 0.293e-15■□□□□ 9.8
SND1Q7KZF4 SLC7A5-202ENST00000563489 780 ntTSL 216.01■□□□□ 0.155e-20■□□□□ 9.8
SND1Q7KZF4 YIF1A-208ENST00000485820 653 ntTSL 215.46■□□□□ 0.073e-15■□□□□ 9.8
SND1Q7KZF4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.84□□□□□ -0.033e-15■□□□□ 9.8
SND1Q7KZF4 YIF1A-211ENST00000526497 516 ntTSL 514.8□□□□□ -0.043e-15■□□□□ 9.8
SND1Q7KZF4 SGPL1-203ENST00000409118 462 ntTSL 214.13□□□□□ -0.153e-6■□□□□ 9.8
SND1Q7KZF4 SGPL1-206ENST00000613857 541 ntTSL 413.1□□□□□ -0.313e-6■□□□□ 9.8
SND1Q7KZF4 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC12.49□□□□□ -0.415e-20■□□□□ 9.8
SND1Q7KZF4 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-8■□□□□ 9.8
SND1Q7KZF4 F11-202ENST00000264692 1916 ntTSL 2 BASIC10.47□□□□□ -0.732e-8■□□□□ 9.8
SND1Q7KZF4 SGPL1-205ENST00000611290 670 ntTSL 510.39□□□□□ -0.753e-6■□□□□ 9.8
SND1Q7KZF4 SORL1-213ENST00000534754 2222 ntTSL 39.9□□□□□ -0.823e-6■□□□□ 9.8
SND1Q7KZF4 SORL1-202ENST00000524633 1338 ntTSL 58.27□□□□□ -1.093e-6■□□□□ 9.8
SND1Q7KZF4 SORL1-207ENST00000528339 3703 ntTSL 28□□□□□ -1.133e-6■□□□□ 9.8
SND1Q7KZF4 SGPL1-201ENST00000299297 658 ntTSL 26.99□□□□□ -1.293e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-212ENST00000514508 635 ntTSL 412.87□□□□□ -0.355e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-211ENST00000513274 729 ntTSL 311.83□□□□□ -0.525e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-209ENST00000512242 848 ntTSL 511.26□□□□□ -0.615e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-208ENST00000512153 629 ntTSL 411.1□□□□□ -0.635e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-207ENST00000510491 669 ntTSL 510.04□□□□□ -0.85e-6■□□□□ 9.8
SND1Q7KZF4 COPB2-213ENST00000515006 548 ntTSL 56.32□□□□□ -1.45e-6■□□□□ 9.8
SND1Q7KZF4 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC12.87□□□□□ -0.352e-21■□□□□ 9.8
SND1Q7KZF4 RPS21-205ENST00000492356 429 ntTSL 1 (best)12.6□□□□□ -0.392e-21■□□□□ 9.8
SND1Q7KZF4 RPS21-203ENST00000370592 401 ntTSL 212.58□□□□□ -0.42e-21■□□□□ 9.8
SND1Q7KZF4 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.542e-21■□□□□ 9.8
SND1Q7KZF4 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.822e-21■□□□□ 9.8
SND1Q7KZF4 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)29.98■■■□□ 2.393e-9■□□□□ 9.8
SND1Q7KZF4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.474e-6■□□□□ 9.8
SND1Q7KZF4 FCGRT-206ENST00000594823 819 ntTSL 515.64■□□□□ 0.092e-13■□□□□ 9.8
SND1Q7KZF4 FCGRT-204ENST00000593381 566 ntTSL 413.88□□□□□ -0.192e-13■□□□□ 9.8
SND1Q7KZF4 SLC38A3-201ENST00000417121 491 ntTSL 518.09■□□□□ 0.496e-9■□□□□ 9.8
Retrieved 100 of 13,567 protein–RNA pairs in 260.9 ms