RNA–Protein interactions for RNA: ENST00000480185.1

MMP11-209, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 370 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-209ENST00000480185 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
MMP11-209ENST00000480185 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
MMP11-209ENST00000480185 ABCC9O60706 1549 aa28.98■■■□□ 2.23
MMP11-209ENST00000480185 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
MMP11-209ENST00000480185 NACADO15069 1562 aa27.67■■■□□ 2.02
MMP11-209ENST00000480185 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
MMP11-209ENST00000480185 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
MMP11-209ENST00000480185 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
MMP11-209ENST00000480185 DCAF1Q9Y4B6 1507 aa27.23■■□□□ 1.95
MMP11-209ENST00000480185 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
MMP11-209ENST00000480185 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
MMP11-209ENST00000480185 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
MMP11-209ENST00000480185 DNAJC5BQ9UF47 199 aa26.91■■□□□ 1.9
MMP11-209ENST00000480185 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
MMP11-209ENST00000480185 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
MMP11-209ENST00000480185 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
MMP11-209ENST00000480185 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
MMP11-209ENST00000480185 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
MMP11-209ENST00000480185 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
MMP11-209ENST00000480185 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
MMP11-209ENST00000480185 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
MMP11-209ENST00000480185 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
MMP11-209ENST00000480185 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
MMP11-209ENST00000480185 HMGXB3Q12766 1538 aa25.39■■□□□ 1.66
MMP11-209ENST00000480185 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
MMP11-209ENST00000480185 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
MMP11-209ENST00000480185 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
MMP11-209ENST00000480185 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
MMP11-209ENST00000480185 NESP48681 1621 aa25■■□□□ 1.59
MMP11-209ENST00000480185 WIZO95785 1651 aa25■■□□□ 1.59
MMP11-209ENST00000480185 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
MMP11-209ENST00000480185 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
MMP11-209ENST00000480185 CUX2O14529 1486 aa24.86■■□□□ 1.57
MMP11-209ENST00000480185 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
MMP11-209ENST00000480185 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
MMP11-209ENST00000480185 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
MMP11-209ENST00000480185 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
MMP11-209ENST00000480185 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
MMP11-209ENST00000480185 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
MMP11-209ENST00000480185 CFTRP13569 1480 aa24.61■■□□□ 1.53
MMP11-209ENST00000480185 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
MMP11-209ENST00000480185 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
MMP11-209ENST00000480185 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
MMP11-209ENST00000480185 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
MMP11-209ENST00000480185 WDR62O43379 1518 aa24.44■■□□□ 1.5
MMP11-209ENST00000480185 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
MMP11-209ENST00000480185 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
MMP11-209ENST00000480185 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
MMP11-209ENST00000480185 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
MMP11-209ENST00000480185 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
MMP11-209ENST00000480185 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
MMP11-209ENST00000480185 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
MMP11-209ENST00000480185 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
MMP11-209ENST00000480185 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
MMP11-209ENST00000480185 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
MMP11-209ENST00000480185 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
MMP11-209ENST00000480185 CUX1P39880 1505 aa23.79■■□□□ 1.4
MMP11-209ENST00000480185 SOGA1O94964 1423 aa23.77■■□□□ 1.4
MMP11-209ENST00000480185 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
MMP11-209ENST00000480185 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.396e-9■■□□□ 14
MMP11-209ENST00000480185 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
MMP11-209ENST00000480185 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
MMP11-209ENST00000480185 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
MMP11-209ENST00000480185 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
MMP11-209ENST00000480185 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
MMP11-209ENST00000480185 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
MMP11-209ENST00000480185 FBLN2P98095 1184 aa23.53■■□□□ 1.36
MMP11-209ENST00000480185 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
MMP11-209ENST00000480185 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
MMP11-209ENST00000480185 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
MMP11-209ENST00000480185 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
MMP11-209ENST00000480185 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
MMP11-209ENST00000480185 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
MMP11-209ENST00000480185 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
MMP11-209ENST00000480185 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
MMP11-209ENST00000480185 CHD1O14646 1710 aa23.45■■□□□ 1.34
MMP11-209ENST00000480185 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
MMP11-209ENST00000480185 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
MMP11-209ENST00000480185 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
MMP11-209ENST00000480185 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
MMP11-209ENST00000480185 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
MMP11-209ENST00000480185 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
MMP11-209ENST00000480185 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
MMP11-209ENST00000480185 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
MMP11-209ENST00000480185 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
MMP11-209ENST00000480185 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
MMP11-209ENST00000480185 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
MMP11-209ENST00000480185 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
MMP11-209ENST00000480185 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
MMP11-209ENST00000480185 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
MMP11-209ENST00000480185 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
MMP11-209ENST00000480185 NUP160Q12769 1436 aa23.14■■□□□ 1.29
MMP11-209ENST00000480185 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
MMP11-209ENST00000480185 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
MMP11-209ENST00000480185 IGF1RP08069 1367 aa23.05■■□□□ 1.28
MMP11-209ENST00000480185 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
MMP11-209ENST00000480185 CUL7Q14999 1698 aa22.93■■□□□ 1.26
MMP11-209ENST00000480185 ERCC6L2Q5T890 1561 aa22.92■■□□□ 1.26
MMP11-209ENST00000480185 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
MMP11-209ENST00000480185 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms