RNA–Protein interactions for RNA: ENST00000409118.2

SGPL1-203, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 2

Gene SGPL1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-203ENST00000409118 AEBP2Q6ZN18 517 aaPredicted RBP32.52■■■□□ 2.8
SGPL1-203ENST00000409118 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
SGPL1-203ENST00000409118 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
SGPL1-203ENST00000409118 CCDC180Q9P1Z9 1646 aa28.73■■■□□ 2.19
SGPL1-203ENST00000409118 SENP3Q9H4L4 574 aaPredicted RBP27.93■■■□□ 2.06
SGPL1-203ENST00000409118 ABCC9O60706 1549 aa27.92■■■□□ 2.06
SGPL1-203ENST00000409118 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
SGPL1-203ENST00000409118 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
SGPL1-203ENST00000409118 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
SGPL1-203ENST00000409118 NACADO15069 1562 aa27■■□□□ 1.91
SGPL1-203ENST00000409118 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
SGPL1-203ENST00000409118 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
SGPL1-203ENST00000409118 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
SGPL1-203ENST00000409118 POTEDQ86YR6 584 aa26.77■■□□□ 1.88
SGPL1-203ENST00000409118 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
SGPL1-203ENST00000409118 SCRIBQ14160 1630 aa26.22■■□□□ 1.79
SGPL1-203ENST00000409118 FOXD1Q16676 465 aa26.21■■□□□ 1.79
SGPL1-203ENST00000409118 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
SGPL1-203ENST00000409118 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
SGPL1-203ENST00000409118 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
SGPL1-203ENST00000409118 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
SGPL1-203ENST00000409118 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
SGPL1-203ENST00000409118 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
SGPL1-203ENST00000409118 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
SGPL1-203ENST00000409118 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
SGPL1-203ENST00000409118 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
SGPL1-203ENST00000409118 MSH5O43196 834 aa25.05■■□□□ 1.6
SGPL1-203ENST00000409118 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
SGPL1-203ENST00000409118 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
SGPL1-203ENST00000409118 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
SGPL1-203ENST00000409118 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
SGPL1-203ENST00000409118 PEG3Q9GZU2 1588 aa24.85■■□□□ 1.57
SGPL1-203ENST00000409118 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
SGPL1-203ENST00000409118 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
SGPL1-203ENST00000409118 RSF1Q96T23 1441 aaPredicted RBP24.76■■□□□ 1.55
SGPL1-203ENST00000409118 WIZO95785 1651 aa24.69■■□□□ 1.54
SGPL1-203ENST00000409118 TOP2AP11388 1531 aaKnown RBP24.48■■□□□ 1.51
SGPL1-203ENST00000409118 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
SGPL1-203ENST00000409118 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
SGPL1-203ENST00000409118 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
SGPL1-203ENST00000409118 NESP48681 1621 aa24.19■■□□□ 1.46
SGPL1-203ENST00000409118 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
SGPL1-203ENST00000409118 PIAS4Q8N2W9 510 aaPredicted RBP24.15■■□□□ 1.46
SGPL1-203ENST00000409118 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
SGPL1-203ENST00000409118 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
SGPL1-203ENST00000409118 CFTRP13569 1480 aa24.07■■□□□ 1.44
SGPL1-203ENST00000409118 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
SGPL1-203ENST00000409118 KIF21AQ7Z4S6 1674 aa23.9■■□□□ 1.42
SGPL1-203ENST00000409118 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
SGPL1-203ENST00000409118 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
SGPL1-203ENST00000409118 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
SGPL1-203ENST00000409118 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
SGPL1-203ENST00000409118 CUX2O14529 1486 aa23.77■■□□□ 1.4
SGPL1-203ENST00000409118 WDR62O43379 1518 aa23.69■■□□□ 1.38
SGPL1-203ENST00000409118 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
SGPL1-203ENST00000409118 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
SGPL1-203ENST00000409118 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
SGPL1-203ENST00000409118 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
SGPL1-203ENST00000409118 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
SGPL1-203ENST00000409118 CUX1P39880 1505 aa23.4■■□□□ 1.34
SGPL1-203ENST00000409118 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
SGPL1-203ENST00000409118 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
SGPL1-203ENST00000409118 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
SGPL1-203ENST00000409118 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
SGPL1-203ENST00000409118 SOGA1O94964 1423 aa23.29■■□□□ 1.32
SGPL1-203ENST00000409118 ADRA2BP18089 450 aa23.29■■□□□ 1.32
SGPL1-203ENST00000409118 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
SGPL1-203ENST00000409118 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
SGPL1-203ENST00000409118 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
SGPL1-203ENST00000409118 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
SGPL1-203ENST00000409118 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
SGPL1-203ENST00000409118 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
SGPL1-203ENST00000409118 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
SGPL1-203ENST00000409118 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
SGPL1-203ENST00000409118 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
SGPL1-203ENST00000409118 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
SGPL1-203ENST00000409118 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
SGPL1-203ENST00000409118 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
SGPL1-203ENST00000409118 TRIM41Q8WV44 630 aa23■■□□□ 1.27
SGPL1-203ENST00000409118 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
SGPL1-203ENST00000409118 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
SGPL1-203ENST00000409118 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
SGPL1-203ENST00000409118 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
SGPL1-203ENST00000409118 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
SGPL1-203ENST00000409118 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
SGPL1-203ENST00000409118 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
SGPL1-203ENST00000409118 FBLN2P98095 1184 aa22.86■■□□□ 1.25
SGPL1-203ENST00000409118 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
SGPL1-203ENST00000409118 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
SGPL1-203ENST00000409118 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
SGPL1-203ENST00000409118 SYNJ2O15056 1496 aa22.82■■□□□ 1.24
SGPL1-203ENST00000409118 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
SGPL1-203ENST00000409118 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
SGPL1-203ENST00000409118 CHD1O14646 1710 aa22.77■■□□□ 1.23
SGPL1-203ENST00000409118 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
SGPL1-203ENST00000409118 IGF1RP08069 1367 aa22.74■■□□□ 1.23
SGPL1-203ENST00000409118 CUL7Q14999 1698 aa22.68■■□□□ 1.22
SGPL1-203ENST00000409118 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
SGPL1-203ENST00000409118 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
SGPL1-203ENST00000409118 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms