RNA–Protein interactions for RNA: ENST00000475011.1

TFR2-211, Transcript of transferrin receptor 2, humanhuman

TSL 2

Gene TFR2, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-211ENST00000475011 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.52
TFR2-211ENST00000475011 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
TFR2-211ENST00000475011 ABCC9O60706 1549 aa37.75■■■■□ 3.63
TFR2-211ENST00000475011 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
TFR2-211ENST00000475011 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
TFR2-211ENST00000475011 NACADO15069 1562 aa36.18■■■■□ 3.38
TFR2-211ENST00000475011 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
TFR2-211ENST00000475011 MYO15BQ96JP2 1530 aa35.96■■■■□ 3.35
TFR2-211ENST00000475011 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
TFR2-211ENST00000475011 PABPN1Q86U42 306 aaKnown RBP eCLIP35.36■■■■□ 3.25
TFR2-211ENST00000475011 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
TFR2-211ENST00000475011 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
TFR2-211ENST00000475011 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
TFR2-211ENST00000475011 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
TFR2-211ENST00000475011 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
TFR2-211ENST00000475011 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
TFR2-211ENST00000475011 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
TFR2-211ENST00000475011 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
TFR2-211ENST00000475011 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
TFR2-211ENST00000475011 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
TFR2-211ENST00000475011 ATAD2BQ9ULI0 1458 aa33.46■■■□□ 2.95
TFR2-211ENST00000475011 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
TFR2-211ENST00000475011 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
TFR2-211ENST00000475011 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
TFR2-211ENST00000475011 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
TFR2-211ENST00000475011 HMGXB3Q12766 1538 aa33.2■■■□□ 2.91
TFR2-211ENST00000475011 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
TFR2-211ENST00000475011 RSF1Q96T23 1441 aaPredicted RBP33.03■■■□□ 2.88
TFR2-211ENST00000475011 WIZO95785 1651 aa33.01■■■□□ 2.87
TFR2-211ENST00000475011 NESP48681 1621 aa32.68■■■□□ 2.82
TFR2-211ENST00000475011 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
TFR2-211ENST00000475011 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
TFR2-211ENST00000475011 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
TFR2-211ENST00000475011 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
TFR2-211ENST00000475011 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
TFR2-211ENST00000475011 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
TFR2-211ENST00000475011 CFTRP13569 1480 aa32.27■■■□□ 2.76
TFR2-211ENST00000475011 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
TFR2-211ENST00000475011 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
TFR2-211ENST00000475011 CUX2O14529 1486 aa32.16■■■□□ 2.74
TFR2-211ENST00000475011 THOC2Q8NI27 1593 aaKnown RBP32.1■■■□□ 2.73
TFR2-211ENST00000475011 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
TFR2-211ENST00000475011 CEP164Q9UPV0 1460 aa32.01■■■□□ 2.71
TFR2-211ENST00000475011 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
TFR2-211ENST00000475011 WDR62O43379 1518 aa31.86■■■□□ 2.69
TFR2-211ENST00000475011 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
TFR2-211ENST00000475011 URB2Q14146 1524 aaKnown RBP31.78■■■□□ 2.68
TFR2-211ENST00000475011 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
TFR2-211ENST00000475011 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
TFR2-211ENST00000475011 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
TFR2-211ENST00000475011 IFT140Q96RY7 1462 aa31.36■■■□□ 2.61
TFR2-211ENST00000475011 DNAJC5Q9H3Z4 198 aa31.35■■■□□ 2.61
TFR2-211ENST00000475011 CUX1P39880 1505 aa31.32■■■□□ 2.6
TFR2-211ENST00000475011 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
TFR2-211ENST00000475011 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
TFR2-211ENST00000475011 SOGA1O94964 1423 aa31.21■■■□□ 2.59
TFR2-211ENST00000475011 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
TFR2-211ENST00000475011 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
TFR2-211ENST00000475011 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
TFR2-211ENST00000475011 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.573e-22■■■■□ 24.1
TFR2-211ENST00000475011 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
TFR2-211ENST00000475011 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
TFR2-211ENST00000475011 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
TFR2-211ENST00000475011 SYNJ1O43426 1573 aa31.01■■■□□ 2.56
TFR2-211ENST00000475011 TOP2BQ02880 1626 aa31■■■□□ 2.55
TFR2-211ENST00000475011 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
TFR2-211ENST00000475011 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
TFR2-211ENST00000475011 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
TFR2-211ENST00000475011 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
TFR2-211ENST00000475011 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
TFR2-211ENST00000475011 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
TFR2-211ENST00000475011 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
TFR2-211ENST00000475011 FBLN2P98095 1184 aa30.75■■■□□ 2.51
TFR2-211ENST00000475011 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
TFR2-211ENST00000475011 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
TFR2-211ENST00000475011 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
TFR2-211ENST00000475011 CHD1O14646 1710 aa30.64■■■□□ 2.5
TFR2-211ENST00000475011 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
TFR2-211ENST00000475011 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
TFR2-211ENST00000475011 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
TFR2-211ENST00000475011 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
TFR2-211ENST00000475011 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
TFR2-211ENST00000475011 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
TFR2-211ENST00000475011 IGF1RP08069 1367 aa30.41■■■□□ 2.46
TFR2-211ENST00000475011 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
TFR2-211ENST00000475011 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
TFR2-211ENST00000475011 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
TFR2-211ENST00000475011 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
TFR2-211ENST00000475011 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
TFR2-211ENST00000475011 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
TFR2-211ENST00000475011 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
TFR2-211ENST00000475011 NUP160Q12769 1436 aa30.29■■■□□ 2.44
TFR2-211ENST00000475011 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
TFR2-211ENST00000475011 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
TFR2-211ENST00000475011 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
TFR2-211ENST00000475011 CUL7Q14999 1698 aa30.17■■■□□ 2.42
TFR2-211ENST00000475011 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
TFR2-211ENST00000475011 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
TFR2-211ENST00000475011 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
TFR2-211ENST00000475011 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms