RNA–Protein interactions for RNA: ENST00000613857.4

SGPL1-206, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 4

Gene SGPL1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-206ENST00000613857 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
SGPL1-206ENST00000613857 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
SGPL1-206ENST00000613857 ABCC9O60706 1549 aa27.14■■□□□ 1.94
SGPL1-206ENST00000613857 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
SGPL1-206ENST00000613857 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
SGPL1-206ENST00000613857 NACADO15069 1562 aa25.9■■□□□ 1.74
SGPL1-206ENST00000613857 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
SGPL1-206ENST00000613857 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
SGPL1-206ENST00000613857 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
SGPL1-206ENST00000613857 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
SGPL1-206ENST00000613857 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
SGPL1-206ENST00000613857 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
SGPL1-206ENST00000613857 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
SGPL1-206ENST00000613857 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
SGPL1-206ENST00000613857 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
SGPL1-206ENST00000613857 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
SGPL1-206ENST00000613857 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
SGPL1-206ENST00000613857 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
SGPL1-206ENST00000613857 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
SGPL1-206ENST00000613857 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.43
SGPL1-206ENST00000613857 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
SGPL1-206ENST00000613857 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
SGPL1-206ENST00000613857 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
SGPL1-206ENST00000613857 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
SGPL1-206ENST00000613857 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
SGPL1-206ENST00000613857 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
SGPL1-206ENST00000613857 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
SGPL1-206ENST00000613857 WIZO95785 1651 aa23.6■■□□□ 1.37
SGPL1-206ENST00000613857 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
SGPL1-206ENST00000613857 NESP48681 1621 aa23.45■■□□□ 1.34
SGPL1-206ENST00000613857 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
SGPL1-206ENST00000613857 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
SGPL1-206ENST00000613857 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
SGPL1-206ENST00000613857 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
SGPL1-206ENST00000613857 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
SGPL1-206ENST00000613857 CUX2O14529 1486 aa23.12■■□□□ 1.29
SGPL1-206ENST00000613857 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
SGPL1-206ENST00000613857 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
SGPL1-206ENST00000613857 CFTRP13569 1480 aa23.06■■□□□ 1.28
SGPL1-206ENST00000613857 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
SGPL1-206ENST00000613857 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
SGPL1-206ENST00000613857 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
SGPL1-206ENST00000613857 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
SGPL1-206ENST00000613857 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
SGPL1-206ENST00000613857 WDR62O43379 1518 aa22.84■■□□□ 1.25
SGPL1-206ENST00000613857 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
SGPL1-206ENST00000613857 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
SGPL1-206ENST00000613857 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
SGPL1-206ENST00000613857 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
SGPL1-206ENST00000613857 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
SGPL1-206ENST00000613857 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
SGPL1-206ENST00000613857 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
SGPL1-206ENST00000613857 ZNF608Q9ULD9 1512 aaPredicted RBP22.42■■□□□ 1.18
SGPL1-206ENST00000613857 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
SGPL1-206ENST00000613857 CUX1P39880 1505 aa22.38■■□□□ 1.17
SGPL1-206ENST00000613857 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
SGPL1-206ENST00000613857 SOGA1O94964 1423 aa22.33■■□□□ 1.17
SGPL1-206ENST00000613857 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
SGPL1-206ENST00000613857 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
SGPL1-206ENST00000613857 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.16
SGPL1-206ENST00000613857 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
SGPL1-206ENST00000613857 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
SGPL1-206ENST00000613857 OSCARQ8IYS5 282 aa22.23■■□□□ 1.15
SGPL1-206ENST00000613857 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
SGPL1-206ENST00000613857 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
SGPL1-206ENST00000613857 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
SGPL1-206ENST00000613857 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
SGPL1-206ENST00000613857 FBLN2P98095 1184 aa22.1■■□□□ 1.13
SGPL1-206ENST00000613857 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
SGPL1-206ENST00000613857 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
SGPL1-206ENST00000613857 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
SGPL1-206ENST00000613857 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
SGPL1-206ENST00000613857 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
SGPL1-206ENST00000613857 CHD1O14646 1710 aa22.01■■□□□ 1.11
SGPL1-206ENST00000613857 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
SGPL1-206ENST00000613857 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
SGPL1-206ENST00000613857 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
SGPL1-206ENST00000613857 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
SGPL1-206ENST00000613857 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
SGPL1-206ENST00000613857 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
SGPL1-206ENST00000613857 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
SGPL1-206ENST00000613857 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
SGPL1-206ENST00000613857 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
SGPL1-206ENST00000613857 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
SGPL1-206ENST00000613857 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
SGPL1-206ENST00000613857 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
SGPL1-206ENST00000613857 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
SGPL1-206ENST00000613857 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
SGPL1-206ENST00000613857 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
SGPL1-206ENST00000613857 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
SGPL1-206ENST00000613857 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
SGPL1-206ENST00000613857 IGF1RP08069 1367 aa21.7■■□□□ 1.06
SGPL1-206ENST00000613857 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
SGPL1-206ENST00000613857 NUP160Q12769 1436 aa21.66■■□□□ 1.06
SGPL1-206ENST00000613857 ARAP1Q96P48 1450 aa21.64■■□□□ 1.06
SGPL1-206ENST00000613857 RUSC2Q8N2Y8 1516 aa21.57■■□□□ 1.04
SGPL1-206ENST00000613857 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
SGPL1-206ENST00000613857 CUL7Q14999 1698 aa21.55■■□□□ 1.04
SGPL1-206ENST00000613857 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
SGPL1-206ENST00000613857 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms