RNA–Protein interactions for RNA: ENST00000611290.4

SGPL1-205, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 5

Gene SGPL1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-205ENST00000611290 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
SGPL1-205ENST00000611290 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
SGPL1-205ENST00000611290 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
SGPL1-205ENST00000611290 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
SGPL1-205ENST00000611290 ABCC9O60706 1549 aa20.63■□□□□ 0.89
SGPL1-205ENST00000611290 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
SGPL1-205ENST00000611290 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
SGPL1-205ENST00000611290 NACADO15069 1562 aa19.88■□□□□ 0.77
SGPL1-205ENST00000611290 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
SGPL1-205ENST00000611290 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
SGPL1-205ENST00000611290 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
SGPL1-205ENST00000611290 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
SGPL1-205ENST00000611290 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
SGPL1-205ENST00000611290 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
SGPL1-205ENST00000611290 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
SGPL1-205ENST00000611290 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
SGPL1-205ENST00000611290 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
SGPL1-205ENST00000611290 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
SGPL1-205ENST00000611290 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
SGPL1-205ENST00000611290 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
SGPL1-205ENST00000611290 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SGPL1-205ENST00000611290 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
SGPL1-205ENST00000611290 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
SGPL1-205ENST00000611290 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
SGPL1-205ENST00000611290 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
SGPL1-205ENST00000611290 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
SGPL1-205ENST00000611290 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
SGPL1-205ENST00000611290 FOXD1Q16676 465 aa18.35■□□□□ 0.53
SGPL1-205ENST00000611290 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
SGPL1-205ENST00000611290 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
SGPL1-205ENST00000611290 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
SGPL1-205ENST00000611290 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
SGPL1-205ENST00000611290 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
SGPL1-205ENST00000611290 WIZO95785 1651 aa18.13■□□□□ 0.49
SGPL1-205ENST00000611290 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
SGPL1-205ENST00000611290 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
SGPL1-205ENST00000611290 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
SGPL1-205ENST00000611290 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
SGPL1-205ENST00000611290 NESP48681 1621 aa17.84■□□□□ 0.45
SGPL1-205ENST00000611290 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
SGPL1-205ENST00000611290 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
SGPL1-205ENST00000611290 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
SGPL1-205ENST00000611290 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
SGPL1-205ENST00000611290 CFTRP13569 1480 aa17.72■□□□□ 0.43
SGPL1-205ENST00000611290 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
SGPL1-205ENST00000611290 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
SGPL1-205ENST00000611290 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
SGPL1-205ENST00000611290 CUX2O14529 1486 aa17.57■□□□□ 0.4
SGPL1-205ENST00000611290 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
SGPL1-205ENST00000611290 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
SGPL1-205ENST00000611290 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
SGPL1-205ENST00000611290 WDR62O43379 1518 aa17.43■□□□□ 0.38
SGPL1-205ENST00000611290 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
SGPL1-205ENST00000611290 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
SGPL1-205ENST00000611290 MSH5O43196 834 aa17.35■□□□□ 0.37
SGPL1-205ENST00000611290 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
SGPL1-205ENST00000611290 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
SGPL1-205ENST00000611290 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
SGPL1-205ENST00000611290 CUX1P39880 1505 aa17.19■□□□□ 0.34
SGPL1-205ENST00000611290 SOGA1O94964 1423 aa17.18■□□□□ 0.34
SGPL1-205ENST00000611290 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
SGPL1-205ENST00000611290 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
SGPL1-205ENST00000611290 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
SGPL1-205ENST00000611290 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
SGPL1-205ENST00000611290 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
SGPL1-205ENST00000611290 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
SGPL1-205ENST00000611290 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
SGPL1-205ENST00000611290 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
SGPL1-205ENST00000611290 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
SGPL1-205ENST00000611290 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
SGPL1-205ENST00000611290 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
SGPL1-205ENST00000611290 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
SGPL1-205ENST00000611290 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
SGPL1-205ENST00000611290 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
SGPL1-205ENST00000611290 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
SGPL1-205ENST00000611290 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
SGPL1-205ENST00000611290 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
SGPL1-205ENST00000611290 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
SGPL1-205ENST00000611290 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
SGPL1-205ENST00000611290 FBLN2P98095 1184 aa16.94■□□□□ 0.3
SGPL1-205ENST00000611290 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
SGPL1-205ENST00000611290 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
SGPL1-205ENST00000611290 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
SGPL1-205ENST00000611290 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
SGPL1-205ENST00000611290 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
SGPL1-205ENST00000611290 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
SGPL1-205ENST00000611290 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
SGPL1-205ENST00000611290 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
SGPL1-205ENST00000611290 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
SGPL1-205ENST00000611290 CHD1O14646 1710 aa16.77■□□□□ 0.28
SGPL1-205ENST00000611290 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
SGPL1-205ENST00000611290 IGF1RP08069 1367 aa16.75■□□□□ 0.27
SGPL1-205ENST00000611290 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
SGPL1-205ENST00000611290 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
SGPL1-205ENST00000611290 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
SGPL1-205ENST00000611290 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
SGPL1-205ENST00000611290 CUL7Q14999 1698 aa16.64■□□□□ 0.25
SGPL1-205ENST00000611290 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
SGPL1-205ENST00000611290 ADRA2BP18089 450 aa16.61■□□□□ 0.25
SGPL1-205ENST00000611290 NUP160Q12769 1436 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms