RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
LBR-204ENST00000424022 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
LBR-204ENST00000424022 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
LBR-204ENST00000424022 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
LBR-204ENST00000424022 FOXD1Q16676 465 aa21.62■■□□□ 1.05
LBR-204ENST00000424022 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
LBR-204ENST00000424022 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
LBR-204ENST00000424022 ADRA2BP18089 450 aa20.55■□□□□ 0.88
LBR-204ENST00000424022 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
LBR-204ENST00000424022 MSH5O43196 834 aa20.01■□□□□ 0.79
LBR-204ENST00000424022 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
LBR-204ENST00000424022 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
LBR-204ENST00000424022 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
LBR-204ENST00000424022 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
LBR-204ENST00000424022 KCNA4P22459 653 aa18.6■□□□□ 0.57
LBR-204ENST00000424022 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
LBR-204ENST00000424022 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
LBR-204ENST00000424022 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
LBR-204ENST00000424022 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
LBR-204ENST00000424022 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
LBR-204ENST00000424022 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
LBR-204ENST00000424022 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
LBR-204ENST00000424022 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
LBR-204ENST00000424022 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
LBR-204ENST00000424022 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
LBR-204ENST00000424022 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
LBR-204ENST00000424022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.348e-6■□□□□ 8.2
LBR-204ENST00000424022 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
LBR-204ENST00000424022 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
LBR-204ENST00000424022 ZBTB22O15209 634 aa17.09■□□□□ 0.33
LBR-204ENST00000424022 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
LBR-204ENST00000424022 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
LBR-204ENST00000424022 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
LBR-204ENST00000424022 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
LBR-204ENST00000424022 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
LBR-204ENST00000424022 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
LBR-204ENST00000424022 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
LBR-204ENST00000424022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
LBR-204ENST00000424022 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
LBR-204ENST00000424022 CAPN15O75808 1086 aa16.42■□□□□ 0.22
LBR-204ENST00000424022 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
LBR-204ENST00000424022 APLP2Q06481 763 aa16.33■□□□□ 0.2
LBR-204ENST00000424022 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
LBR-204ENST00000424022 DSG3P32926 999 aa16.21■□□□□ 0.19
LBR-204ENST00000424022 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
LBR-204ENST00000424022 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
LBR-204ENST00000424022 ABCB7O75027 752 aa16.11■□□□□ 0.17
LBR-204ENST00000424022 POLA2Q14181 598 aa15.94■□□□□ 0.14
LBR-204ENST00000424022 FKBP8Q14318 412 aa15.68■□□□□ 0.1
LBR-204ENST00000424022 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
LBR-204ENST00000424022 FBLN2P98095 1184 aa15.52■□□□□ 0.08
LBR-204ENST00000424022 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
LBR-204ENST00000424022 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
LBR-204ENST00000424022 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
LBR-204ENST00000424022 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
LBR-204ENST00000424022 PROM2Q8N271 834 aa15.18■□□□□ 0.02
LBR-204ENST00000424022 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
LBR-204ENST00000424022 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
LBR-204ENST00000424022 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
LBR-204ENST00000424022 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
LBR-204ENST00000424022 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
LBR-204ENST00000424022 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
LBR-204ENST00000424022 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
LBR-204ENST00000424022 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
LBR-204ENST00000424022 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
LBR-204ENST00000424022 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
LBR-204ENST00000424022 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
LBR-204ENST00000424022 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
LBR-204ENST00000424022 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
LBR-204ENST00000424022 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
LBR-204ENST00000424022 POTEHQ6S545 545 aa14.85□□□□□ -0.03
LBR-204ENST00000424022 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
LBR-204ENST00000424022 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
LBR-204ENST00000424022 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
LBR-204ENST00000424022 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
LBR-204ENST00000424022 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
LBR-204ENST00000424022 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
LBR-204ENST00000424022 PRR29P0C7W0 189 aa14.59□□□□□ -0.07
LBR-204ENST00000424022 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
LBR-204ENST00000424022 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
LBR-204ENST00000424022 PLEKHG5O94827 1062 aa14.49□□□□□ -0.09
LBR-204ENST00000424022 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
LBR-204ENST00000424022 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
LBR-204ENST00000424022 MIER1Q8N108 512 aa14.47□□□□□ -0.09
LBR-204ENST00000424022 SPOCK2Q92563 424 aa14.46□□□□□ -0.09
LBR-204ENST00000424022 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
LBR-204ENST00000424022 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
LBR-204ENST00000424022 HAX1O00165 279 aa14.32□□□□□ -0.12
LBR-204ENST00000424022 PKD2Q13563 968 aa14.29□□□□□ -0.12
LBR-204ENST00000424022 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
LBR-204ENST00000424022 EVX2Q03828 476 aa14.21□□□□□ -0.13
LBR-204ENST00000424022 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
LBR-204ENST00000424022 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
LBR-204ENST00000424022 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
LBR-204ENST00000424022 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
LBR-204ENST00000424022 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
LBR-204ENST00000424022 GSE1Q14687 1217 aa14.11□□□□□ -0.15
LBR-204ENST00000424022 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
LBR-204ENST00000424022 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
LBR-204ENST00000424022 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms