Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
LST1O00453 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
LST1O00453 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LST1O00453 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
LST1O00453 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LST1O00453 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
LST1O00453 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.89□□□□□ -0.51
LST1O00453 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LST1O00453 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 UNC93B3-201ENST00000308076 687 ntBASIC11.88□□□□□ -0.51
LST1O00453 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
LST1O00453 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.88□□□□□ -0.51
LST1O00453 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC11.88□□□□□ -0.51
LST1O00453 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC11.88□□□□□ -0.51
LST1O00453 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.88□□□□□ -0.51
LST1O00453 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.88□□□□□ -0.51
LST1O00453 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LST1O00453 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 AC022188.1-201ENST00000620960 1664 ntBASIC11.87□□□□□ -0.51
LST1O00453 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 MTMR9LP-203ENST00000426597 1545 ntBASIC11.87□□□□□ -0.51
LST1O00453 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LST1O00453 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LST1O00453 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LST1O00453 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 GRAMD4P2-201ENST00000423297 1097 ntBASIC11.87□□□□□ -0.51
LST1O00453 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC11.87□□□□□ -0.51
LST1O00453 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 AC023632.3-201ENST00000521633 145 ntBASIC11.87□□□□□ -0.51
LST1O00453 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC11.87□□□□□ -0.51
LST1O00453 CCDC92B-201ENST00000575506 885 ntBASIC11.87□□□□□ -0.51
LST1O00453 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC11.87□□□□□ -0.51
LST1O00453 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LST1O00453 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.87□□□□□ -0.51
LST1O00453 AL136379.1-201ENST00000623471 2642 ntBASIC11.87□□□□□ -0.51
LST1O00453 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LST1O00453 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LST1O00453 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LST1O00453 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LST1O00453 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms