Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC4O75487 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GPC4O75487 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC4O75487 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GPC4O75487 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC4O75487 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GPC4O75487 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC4O75487 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC4O75487 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 MIR3180-5-201ENST00000583743 153 ntBASIC18.34■□□□□ 0.53
GPC4O75487 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC4O75487 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC4O75487 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC4O75487 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC4O75487 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
GPC4O75487 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GPC4O75487 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.33■□□□□ 0.53
GPC4O75487 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
GPC4O75487 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC4O75487 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.33■□□□□ 0.53
GPC4O75487 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
GPC4O75487 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
GPC4O75487 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 HMGA1P5-201ENST00000412453 271 ntBASIC18.33■□□□□ 0.52
GPC4O75487 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC4O75487 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC4O75487 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.33■□□□□ 0.52
GPC4O75487 CR769767.2-201ENST00000622735 460 ntBASIC18.33■□□□□ 0.52
GPC4O75487 AC133561.5-201ENST00000635547 218 ntBASIC18.33■□□□□ 0.52
GPC4O75487 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC4O75487 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GPC4O75487 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC4O75487 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC4O75487 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GPC4O75487 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC4O75487 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC4O75487 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC4O75487 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC4O75487 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC4O75487 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC4O75487 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC4O75487 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC4O75487 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms