Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.71■□□□□ 0.11
CITED4Q96RK1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.71■□□□□ 0.11
CITED4Q96RK1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.71■□□□□ 0.11
CITED4Q96RK1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CITED4Q96RK1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.71■□□□□ 0.11
CITED4Q96RK1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CITED4Q96RK1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CITED4Q96RK1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.71■□□□□ 0.1
CITED4Q96RK1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CITED4Q96RK1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.71■□□□□ 0.1
CITED4Q96RK1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.71■□□□□ 0.1
CITED4Q96RK1 AL662844.4-201ENST00000606367 2838 ntBASIC15.71■□□□□ 0.1
CITED4Q96RK1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 AC138907.5-202ENST00000569484 235 ntBASIC15.7■□□□□ 0.1
CITED4Q96RK1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 PCDHB17P-201ENST00000539533 2393 ntBASIC15.7■□□□□ 0.1
CITED4Q96RK1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 AL162741.1-201ENST00000565563 1558 ntBASIC15.7■□□□□ 0.1
CITED4Q96RK1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CITED4Q96RK1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.7■□□□□ 0.1
CITED4Q96RK1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 AC010141.2-201ENST00000452426 721 ntBASIC15.69■□□□□ 0.1
CITED4Q96RK1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 KRT18P6-201ENST00000555540 1265 ntBASIC15.69■□□□□ 0.1
CITED4Q96RK1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 AC053503.5-201ENST00000601508 636 ntBASIC15.69■□□□□ 0.1
CITED4Q96RK1 UBE2DNL-204ENST00000602536 740 ntBASIC15.69■□□□□ 0.1
CITED4Q96RK1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CITED4Q96RK1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.69■□□□□ 0.1
CITED4Q96RK1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CITED4Q96RK1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms