Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 HBZP1-201ENST00000354915 429 ntBASIC16.94■□□□□ 0.3
PER3P56645 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.94■□□□□ 0.3
PER3P56645 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.94■□□□□ 0.3
PER3P56645 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.94■□□□□ 0.3
PER3P56645 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.94■□□□□ 0.3
PER3P56645 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.94■□□□□ 0.3
PER3P56645 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PER3P56645 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PER3P56645 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.93■□□□□ 0.3
PER3P56645 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PER3P56645 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PER3P56645 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PER3P56645 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PER3P56645 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.92■□□□□ 0.3
PER3P56645 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.92■□□□□ 0.3
PER3P56645 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 AC011498.5-201ENST00000592027 486 ntBASIC16.92■□□□□ 0.3
PER3P56645 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PER3P56645 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
PER3P56645 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
PER3P56645 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PER3P56645 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.91■□□□□ 0.3
PER3P56645 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms