Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP4Q6PIL6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP4Q6PIL6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP4Q6PIL6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCNIP4Q6PIL6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 AC104187.1-201ENST00000607510 612 ntBASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCNIP4Q6PIL6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 AC104417.2-201ENST00000562989 1793 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 ZNRF2P3-201ENST00000424200 374 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 SLC7A5P2-201ENST00000553010 536 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 AC018553.1-201ENST00000616682 1458 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 RBM17P2-201ENST00000616397 1405 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 AP001094.4-201ENST00000579008 2176 ntBASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KCNIP4Q6PIL6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CICP6-201ENST00000457191 2729 ntBASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 AC093677.2-201ENST00000600169 1863 ntBASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms