RNA–Protein interactions for RNA: ENST00000575325.1

AP001005.4-202, humanhuman

TSL 4 BASIC

Gene AP001005.4, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001005.4-202ENST00000575325 NISCHQ9Y2I1 1504 aa53.37■■■■■ 6.13
AP001005.4-202ENST00000575325 CCDC180Q9P1Z9 1646 aa47.96■■■■■ 5.27
AP001005.4-202ENST00000575325 ABCC9O60706 1549 aa47.54■■■■■ 5.2
AP001005.4-202ENST00000575325 RB1CC1Q8TDY2 1594 aa45.48■■■■■ 4.87
AP001005.4-202ENST00000575325 NACADO15069 1562 aa45.19■■■■■ 4.82
AP001005.4-202ENST00000575325 DCAF8L2P0C7V8 631 aa44.85■■■■■ 4.77
AP001005.4-202ENST00000575325 MYO15BQ96JP2 1530 aa44.61■■■■■ 4.73
AP001005.4-202ENST00000575325 UNC13AQ9UPW8 1703 aa44.49■■■■■ 4.71
AP001005.4-202ENST00000575325 ZCCHC6Q5VYS8 1495 aaKnown RBP44.31■■■■■ 4.68
AP001005.4-202ENST00000575325 PABPN1Q86U42 306 aaKnown RBP eCLIP44.19■■■■■ 4.66
AP001005.4-202ENST00000575325 DNAJC5BQ9UF47 199 aa44.17■■■■■ 4.66
AP001005.4-202ENST00000575325 DCAF1Q9Y4B6 1507 aa44.14■■■■■ 4.66
AP001005.4-202ENST00000575325 BICRAQ9NZM4 1560 aa44.04■■■■■ 4.64
AP001005.4-202ENST00000575325 SCRIBQ14160 1630 aa43.64■■■■■ 4.58
AP001005.4-202ENST00000575325 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
AP001005.4-202ENST00000575325 CC2D2AQ9P2K1 1620 aa43.02■■■■■ 4.48
AP001005.4-202ENST00000575325 EIF4G1Q04637 1599 aaKnown RBP42.99■■■■■ 4.47
AP001005.4-202ENST00000575325 CECR2Q9BXF3 1484 aa42.81■■■■■ 4.44
AP001005.4-202ENST00000575325 SMARCA4P51532 1647 aa41.65■■■■■ 4.26
AP001005.4-202ENST00000575325 NCAPD3P42695 1498 aa41.61■■■■■ 4.25
AP001005.4-202ENST00000575325 SMARCA2P51531 1590 aa41.54■■■■■ 4.24
AP001005.4-202ENST00000575325 ATAD2BQ9ULI0 1458 aa41.53■■■■■ 4.24
AP001005.4-202ENST00000575325 BAZ1AQ9NRL2 1556 aaPredicted RBP41.48■■■■■ 4.23
AP001005.4-202ENST00000575325 HMGXB3Q12766 1538 aa41.44■■■■■ 4.23
AP001005.4-202ENST00000575325 BAZ1BQ9UIG0 1483 aaKnown RBP41.22■■■■■ 4.19
AP001005.4-202ENST00000575325 PEG3Q9GZU2 1588 aa41.22■■■■■ 4.19
AP001005.4-202ENST00000575325 ERCC6Q03468 1493 aa41.12■■■■■ 4.17
AP001005.4-202ENST00000575325 MROH2BQ7Z745 1585 aa41.09■■■■■ 4.17
AP001005.4-202ENST00000575325 CUX2O14529 1486 aa40.95■■■■■ 4.15
AP001005.4-202ENST00000575325 NESP48681 1621 aa40.88■■■■■ 4.13
AP001005.4-202ENST00000575325 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
AP001005.4-202ENST00000575325 WIZO95785 1651 aa40.68■■■■■ 4.1
AP001005.4-202ENST00000575325 THOC2Q8NI27 1593 aaKnown RBP40.54■■■■■ 4.08
AP001005.4-202ENST00000575325 KIF21AQ7Z4S6 1674 aa40.53■■■■■ 4.08
AP001005.4-202ENST00000575325 DNAJC5Q9H3Z4 198 aa40.47■■■■■ 4.07
AP001005.4-202ENST00000575325 PDS5BQ9NTI5 1447 aa40.45■■■■■ 4.07
AP001005.4-202ENST00000575325 CADPSQ9ULU8 1353 aa40.35■■■■■ 4.05
AP001005.4-202ENST00000575325 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
AP001005.4-202ENST00000575325 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
AP001005.4-202ENST00000575325 MRC2Q9UBG0 1479 aa40.12■■■■■ 4.01
AP001005.4-202ENST00000575325 CEP164Q9UPV0 1460 aa40.03■■■■■ 4
AP001005.4-202ENST00000575325 WDR62O43379 1518 aa40.02■■■■■ 4
AP001005.4-202ENST00000575325 CFTRP13569 1480 aa39.97■■■■□ 3.99
AP001005.4-202ENST00000575325 FANCD2Q9BXW9 1451 aa39.95■■■■□ 3.99
AP001005.4-202ENST00000575325 PRDM2Q13029 1718 aa39.85■■■■□ 3.97
AP001005.4-202ENST00000575325 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
AP001005.4-202ENST00000575325 URB2Q14146 1524 aaKnown RBP39.58■■■■□ 3.93
AP001005.4-202ENST00000575325 TOPBP1Q92547 1522 aa39.22■■■■□ 3.87
AP001005.4-202ENST00000575325 ABCC8Q09428 1581 aa39.2■■■■□ 3.87
AP001005.4-202ENST00000575325 IFT140Q96RY7 1462 aa39.18■■■■□ 3.86
AP001005.4-202ENST00000575325 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
AP001005.4-202ENST00000575325 ZNF608Q9ULD9 1512 aaPredicted RBP39.03■■■■□ 3.84
AP001005.4-202ENST00000575325 OSCARQ8IYS5 282 aa39■■■■□ 3.83
AP001005.4-202ENST00000575325 EIF4G3O43432 1585 aaKnown RBP38.97■■■■□ 3.83
AP001005.4-202ENST00000575325 TARBP1Q13395 1621 aaKnown RBP38.89■■■■□ 3.82
AP001005.4-202ENST00000575325 TRIM41Q8WV44 630 aa38.87■■■■□ 3.81
AP001005.4-202ENST00000575325 POLA1P09884 1462 aaPredicted RBP38.83■■■■□ 3.81
AP001005.4-202ENST00000575325 AQRO60306 1485 aaKnown RBP eCLIP38.69■■■■□ 3.78
AP001005.4-202ENST00000575325 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
AP001005.4-202ENST00000575325 CHD1O14646 1710 aa38.66■■■■□ 3.78
AP001005.4-202ENST00000575325 FGD5Q6ZNL6 1462 aa38.64■■■■□ 3.78
AP001005.4-202ENST00000575325 RAD54L2Q9Y4B4 1467 aa38.63■■■■□ 3.77
AP001005.4-202ENST00000575325 CUX1P39880 1505 aa38.63■■■■□ 3.77
AP001005.4-202ENST00000575325 SOGA1O94964 1423 aa38.62■■■■□ 3.77
AP001005.4-202ENST00000575325 WDR97A6NE52 1622 aa38.61■■■■□ 3.77
AP001005.4-202ENST00000575325 RIMBP3CA6NJZ7 1639 aa38.6■■■■□ 3.77
AP001005.4-202ENST00000575325 RIMBP3BA6NNM3 1639 aa38.6■■■■□ 3.77
AP001005.4-202ENST00000575325 RIMBP3Q9UFD9 1639 aa38.6■■■■□ 3.77
AP001005.4-202ENST00000575325 TDRD9Q8NDG6 1382 aaKnown RBP38.47■■■■□ 3.75
AP001005.4-202ENST00000575325 ARHGEF11O15085 1522 aa38.47■■■■□ 3.75
AP001005.4-202ENST00000575325 FBLN2P98095 1184 aa38.41■■■■□ 3.74
AP001005.4-202ENST00000575325 SNAPC4Q5SXM2 1469 aa38.39■■■■□ 3.74
AP001005.4-202ENST00000575325 MAGI1Q96QZ7 1491 aaPredicted RBP38.33■■■■□ 3.73
AP001005.4-202ENST00000575325 PBRM1Q86U86 1689 aa38.33■■■■□ 3.73
AP001005.4-202ENST00000575325 GRIN2BQ13224 1484 aa38.32■■■■□ 3.72
AP001005.4-202ENST00000575325 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
AP001005.4-202ENST00000575325 ABCA10Q8WWZ4 1543 aa38.21■■■■□ 3.71
AP001005.4-202ENST00000575325 GAPVD1Q14C86 1478 aa38.21■■■■□ 3.71
AP001005.4-202ENST00000575325 ABCA5Q8WWZ7 1642 aa38.2■■■■□ 3.7
AP001005.4-202ENST00000575325 SYNJ2O15056 1496 aa38.17■■■■□ 3.7
AP001005.4-202ENST00000575325 BIVM-ERCC5R4GMW8 1640 aa38.17■■■■□ 3.7
AP001005.4-202ENST00000575325 CHMP7Q8WUX9 453 aaPredicted RBP38.17■■■■□ 3.7
AP001005.4-202ENST00000575325 CLASP1Q7Z460 1538 aa38.13■■■■□ 3.69
AP001005.4-202ENST00000575325 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
AP001005.4-202ENST00000575325 WRNQ14191 1432 aaPredicted RBP eCLIP38.1■■■■□ 3.69
AP001005.4-202ENST00000575325 ARAP1Q96P48 1450 aa38.07■■■■□ 3.68
AP001005.4-202ENST00000575325 CYB5RLQ6IPT4 315 aa38.05■■■■□ 3.68
AP001005.4-202ENST00000575325 ADAMTS12P58397 1594 aa37.9■■■■□ 3.66
AP001005.4-202ENST00000575325 GRIN2AQ12879 1464 aa37.83■■■■□ 3.65
AP001005.4-202ENST00000575325 ERICH3Q5RHP9 1530 aa37.78■■■■□ 3.64
AP001005.4-202ENST00000575325 FHAD1B1AJZ9 1412 aa37.72■■■■□ 3.63
AP001005.4-202ENST00000575325 CEP170Q5SW79 1584 aa37.69■■■■□ 3.62
AP001005.4-202ENST00000575325 NUP160Q12769 1436 aa37.65■■■■□ 3.62
AP001005.4-202ENST00000575325 TRHP20396 242 aaPredicted RBP37.62■■■■□ 3.61
AP001005.4-202ENST00000575325 SHROOM2Q13796 1616 aa37.54■■■■□ 3.6
AP001005.4-202ENST00000575325 ERCC6L2Q5T890 1561 aa37.5■■■■□ 3.59
AP001005.4-202ENST00000575325 RUSC2Q8N2Y8 1516 aa37.37■■■■□ 3.57
AP001005.4-202ENST00000575325 CUL7Q14999 1698 aa37.37■■■■□ 3.57
AP001005.4-202ENST00000575325 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
AP001005.4-202ENST00000575325 PRG4Q92954 1404 aaPredicted RBP37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms