Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
NEFHP12036 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
NEFHP12036 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.63■□□□□ 0.57
NEFHP12036 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.63■□□□□ 0.57
NEFHP12036 AC060766.5-201ENST00000590539 871 ntBASIC18.63■□□□□ 0.57
NEFHP12036 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.63■□□□□ 0.57
NEFHP12036 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NEFHP12036 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
NEFHP12036 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NEFHP12036 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.63■□□□□ 0.57
NEFHP12036 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.63■□□□□ 0.57
NEFHP12036 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NEFHP12036 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEFHP12036 GNAS-203ENST00000306120 1878 ntBASIC18.63■□□□□ 0.57
NEFHP12036 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 AL499627.1-201ENST00000569373 2188 ntBASIC18.62■□□□□ 0.57
NEFHP12036 AC134043.2-201ENST00000624206 2238 ntBASIC18.62■□□□□ 0.57
NEFHP12036 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.62■□□□□ 0.57
NEFHP12036 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 AC135776.1-201ENST00000319817 2481 ntBASIC18.62■□□□□ 0.57
NEFHP12036 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 TSPY23P-201ENST00000440136 739 ntBASIC18.62■□□□□ 0.57
NEFHP12036 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 PNMA6B-201ENST00000538162 1200 ntBASIC18.62■□□□□ 0.57
NEFHP12036 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
NEFHP12036 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NEFHP12036 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.62■□□□□ 0.57
NEFHP12036 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.62■□□□□ 0.57
NEFHP12036 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NEFHP12036 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEFHP12036 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEFHP12036 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NEFHP12036 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.61■□□□□ 0.57
NEFHP12036 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NEFHP12036 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.61■□□□□ 0.57
NEFHP12036 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
NEFHP12036 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.61■□□□□ 0.57
NEFHP12036 AL160286.2-201ENST00000567150 934 ntBASIC18.61■□□□□ 0.57
NEFHP12036 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.61■□□□□ 0.57
NEFHP12036 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.61■□□□□ 0.57
NEFHP12036 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
NEFHP12036 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.61■□□□□ 0.57
NEFHP12036 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEFHP12036 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms