Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.46□□□□□ -0.25
NACAE9PAV3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.46□□□□□ -0.25
NACAE9PAV3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.46□□□□□ -0.25
NACAE9PAV3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NACAE9PAV3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
NACAE9PAV3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.46□□□□□ -0.25
NACAE9PAV3 AC005332.8-201ENST00000622750 2735 ntBASIC13.46□□□□□ -0.25
NACAE9PAV3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.46□□□□□ -0.25
NACAE9PAV3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.46□□□□□ -0.25
NACAE9PAV3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NACAE9PAV3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NACAE9PAV3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NACAE9PAV3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NACAE9PAV3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NACAE9PAV3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NACAE9PAV3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.46□□□□□ -0.26
NACAE9PAV3 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.46□□□□□ -0.26
NACAE9PAV3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.46□□□□□ -0.26
NACAE9PAV3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.45□□□□□ -0.26
NACAE9PAV3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NACAE9PAV3 AC113347.1-201ENST00000413321 391 ntBASIC13.45□□□□□ -0.26
NACAE9PAV3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.45□□□□□ -0.26
NACAE9PAV3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.45□□□□□ -0.26
NACAE9PAV3 FAM210CP-201ENST00000445714 574 ntBASIC13.45□□□□□ -0.26
NACAE9PAV3 AC091390.4-202ENST00000476426 537 ntBASIC13.45□□□□□ -0.26
NACAE9PAV3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.45□□□□□ -0.26
NACAE9PAV3 AL445228.2-201ENST00000605589 952 ntBASIC13.45□□□□□ -0.26
NACAE9PAV3 AC135050.7-201ENST00000624508 2218 ntBASIC13.45□□□□□ -0.26
NACAE9PAV3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.45□□□□□ -0.26
NACAE9PAV3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NACAE9PAV3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
NACAE9PAV3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NACAE9PAV3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.44□□□□□ -0.26
NACAE9PAV3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.44□□□□□ -0.26
NACAE9PAV3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.44□□□□□ -0.26
NACAE9PAV3 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.44□□□□□ -0.26
NACAE9PAV3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.44□□□□□ -0.26
NACAE9PAV3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NACAE9PAV3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NACAE9PAV3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.44□□□□□ -0.26
NACAE9PAV3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.44□□□□□ -0.26
NACAE9PAV3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.44□□□□□ -0.26
NACAE9PAV3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NACAE9PAV3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms