Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 AC011558.1-201ENST00000623459 338 ntBASIC17.08■□□□□ 0.32
UBQLN3Q9H347 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN3Q9H347 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AL133373.2-201ENST00000623187 2828 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC005332.8-201ENST00000622750 2735 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AP000523.1-201ENST00000398242 1049 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 TSPY5P-201ENST00000426936 936 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 MCCD1P1-208ENST00000445732 328 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 KRT18P35-201ENST00000510488 1269 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC022616.7-201ENST00000525383 220 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AC126763.1-201ENST00000552015 2118 ntBASIC17.07■□□□□ 0.32
UBQLN3Q9H347 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN3Q9H347 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.06■□□□□ 0.32
UBQLN3Q9H347 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 FAM8A6P-201ENST00000407496 1135 ntBASIC17.06■□□□□ 0.32
UBQLN3Q9H347 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 AL109659.2-201ENST00000606809 1674 ntBASIC17.06■□□□□ 0.32
UBQLN3Q9H347 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBQLN3Q9H347 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN3Q9H347 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms