Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 LINC00896-202ENST00000609602 2128 ntBASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01561Q8N1V8 KRT16P1-201ENST00000399124 1418 ntBASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 FAM207BP-201ENST00000447172 505 ntBASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 AC011298.2-201ENST00000617989 482 ntBASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 AL023875.1-201ENST00000640777 796 ntBASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01561Q8N1V8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01561Q8N1V8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms