Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.078e-7■■■□□ 16.9
MATR3P43243 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.85□□□□□ -1.316e-7■■■□□ 16.9
MATR3P43243 AC015574.1-204ENST00000612595 512 ntTSL 54.79□□□□□ -1.646e-7■■■□□ 16.9
MATR3P43243 AC015574.1-203ENST00000614344 498 ntTSL 54.14□□□□□ -1.756e-7■■■□□ 16.9
MATR3P43243 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.713e-8■■■□□ 16.9
MATR3P43243 CHD9-208ENST00000563410 488 ntTSL 222.84■■□□□ 1.251e-7■■■□□ 16.9
MATR3P43243 MED15-229ENST00000489651 3563 ntTSL 1 (best)13.11□□□□□ -0.313e-7■■■□□ 16.9
MATR3P43243 MED15-226ENST00000478831 707 ntTSL 412.51□□□□□ -0.413e-7■■■□□ 16.9
MATR3P43243 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.28■■□□□ 1.322e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.87■□□□□ 0.452e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC11.13□□□□□ -0.632e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.532e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.542e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-211ENST00000557643 872 ntTSL 35.11□□□□□ -1.592e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-207ENST00000554090 543 ntTSL 53.31□□□□□ -1.882e-6■■■□□ 16.8
MATR3P43243 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.952e-6■■■□□ 16.8
MATR3P43243 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.44■□□□□ 0.72e-7■■■□□ 16.8
MATR3P43243 EFCAB11-201ENST00000316738 3095 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.522e-7■■■□□ 16.8
MATR3P43243 EFCAB11-208ENST00000555872 2716 ntTSL 1 (best) BASIC11.46□□□□□ -0.582e-7■■■□□ 16.8
MATR3P43243 EFCAB11-213ENST00000557685 698 ntTSL 34.25□□□□□ -1.732e-7■■■□□ 16.8
MATR3P43243 EFCAB11-204ENST00000553871 624 ntTSL 53.63□□□□□ -1.832e-7■■■□□ 16.8
MATR3P43243 EFCAB11-210ENST00000556078 449 ntTSL 32.94□□□□□ -1.942e-7■■■□□ 16.8
MATR3P43243 EPB41-213ENST00000636666 3642 ntTSL 57.69□□□□□ -1.183e-7■■■□□ 16.8
MATR3P43243 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.64□□□□□ -1.513e-6■■■□□ 16.8
MATR3P43243 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.64□□□□□ -1.513e-6■■■□□ 16.8
MATR3P43243 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.41■□□□□ 0.547e-8■■■□□ 16.8
MATR3P43243 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.64■□□□□ 0.257e-8■■■□□ 16.8
MATR3P43243 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.44■■□□□ 1.026e-8■■■□□ 16.8
MATR3P43243 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.246e-8■■■□□ 16.8
MATR3P43243 MBNL1-208ENST00000460166 552 ntTSL 49.85□□□□□ -0.831e-8■■■□□ 16.8
MATR3P43243 MBNL1-216ENST00000478535 1451 ntTSL 1 (best)7.78□□□□□ -1.161e-8■■■□□ 16.8
MATR3P43243 LUC7L2-209ENST00000608368 551 ntTSL 415.77■□□□□ 0.128e-7■■■□□ 16.8
MATR3P43243 LUC7L2-205ENST00000463912 2382 ntTSL 27.47□□□□□ -1.218e-7■■■□□ 16.8
MATR3P43243 ARHGEF28-208ENST00000509848 560 ntTSL 421.72■■□□□ 1.074e-6■■■□□ 16.8
MATR3P43243 GREB1-207ENST00000432985 2052 ntTSL 1 (best)13.84□□□□□ -0.191e-9■■■□□ 16.8
MATR3P43243 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.42■□□□□ 0.545e-7■■■□□ 16.8
MATR3P43243 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.465e-7■■■□□ 16.8
MATR3P43243 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.98■□□□□ 0.155e-7■■■□□ 16.8
MATR3P43243 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.035e-7■■■□□ 16.8
MATR3P43243 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC11.48□□□□□ -0.572e-7■■■□□ 16.8
MATR3P43243 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-7■■■□□ 16.8
MATR3P43243 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC10.8□□□□□ -0.682e-7■■■□□ 16.8
MATR3P43243 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.722e-7■■■□□ 16.8
MATR3P43243 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.69□□□□□ -0.862e-7■■■□□ 16.8
MATR3P43243 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.942e-7■■■□□ 16.8
MATR3P43243 CENPK-203ENST00000502997 760 ntTSL 33.82□□□□□ -1.81e-11■■■□□ 16.8
MATR3P43243 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.37□□□□□ -1.711e-9■■■□□ 16.8
MATR3P43243 HELLS-203ENST00000371327 4987 ntTSL 24.15□□□□□ -1.741e-9■■■□□ 16.8
MATR3P43243 FAM35A-203ENST00000437629 969 ntTSL 326.24■■□□□ 1.797e-8■■■□□ 16.8
MATR3P43243 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.497e-8■■■□□ 16.8
MATR3P43243 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.07□□□□□ -1.767e-8■■■□□ 16.8
MATR3P43243 MARK3-226ENST00000561314 724 ntTSL 311.78□□□□□ -0.526e-12■■■□□ 16.8
MATR3P43243 MARK3-208ENST00000554627 1571 ntTSL 210.55□□□□□ -0.726e-12■■■□□ 16.8
MATR3P43243 MARK3-211ENST00000556744 1051 ntTSL 1 (best)10.28□□□□□ -0.766e-12■■■□□ 16.8
MATR3P43243 MARK3-218ENST00000559274 1053 ntTSL 210.19□□□□□ -0.786e-12■■■□□ 16.8
MATR3P43243 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.5□□□□□ -1.374e-7■■■□□ 16.8
MATR3P43243 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.514e-7■■■□□ 16.8
MATR3P43243 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.33□□□□□ -1.564e-7■■■□□ 16.8
MATR3P43243 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.11□□□□□ -1.594e-7■■■□□ 16.8
MATR3P43243 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.624e-7■■■□□ 16.8
MATR3P43243 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.58□□□□□ -1.684e-7■■■□□ 16.8
MATR3P43243 CDC45-208ENST00000471470 857 ntTSL 513.84□□□□□ -0.195e-7■■■□□ 16.8
MATR3P43243 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.333e-7■■■□□ 16.8
MATR3P43243 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.573e-7■■■□□ 16.8
MATR3P43243 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.097e-7■■■□□ 16.7
MATR3P43243 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.032e-7■■■□□ 16.7
MATR3P43243 EIF2S3-203ENST00000457332 215 ntTSL 54.37□□□□□ -1.712e-7■■■□□ 16.7
MATR3P43243 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.376e-7■■■□□ 16.7
MATR3P43243 ADIPOR2-204ENST00000537545 484 ntTSL 39.11□□□□□ -0.956e-7■■■□□ 16.7
MATR3P43243 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.271e-6■■■□□ 16.7
MATR3P43243 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.713e-8■■■□□ 16.7
MATR3P43243 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.73e-8■■■□□ 16.7
MATR3P43243 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.472e-6■■■□□ 16.7
MATR3P43243 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.872e-6■■■□□ 16.7
MATR3P43243 E2F5-201ENST00000256117 5042 ntTSL 59□□□□□ -0.973e-8■■■□□ 16.7
MATR3P43243 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.67□□□□□ -1.53e-8■■■□□ 16.7
MATR3P43243 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.96□□□□□ -2.13e-8■■■□□ 16.7
MATR3P43243 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.484e-8■■■□□ 16.7
MATR3P43243 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.464e-8■■■□□ 16.7
MATR3P43243 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.744e-6■■■□□ 16.7
MATR3P43243 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.025e-7■■■□□ 16.7
MATR3P43243 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.095e-7■■■□□ 16.7
MATR3P43243 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.871e-7■■■□□ 16.7
MATR3P43243 SLC35F5-202ENST00000409106 3120 ntTSL 218.6■□□□□ 0.571e-7■■■□□ 16.7
MATR3P43243 SLC35F5-209ENST00000469702 784 ntTSL 39.61□□□□□ -0.871e-7■■■□□ 16.7
MATR3P43243 SLC35F5-204ENST00000420066 736 ntTSL 33.12□□□□□ -1.911e-7■■■□□ 16.7
MATR3P43243 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.988e-7■■■□□ 16.7
MATR3P43243 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.28e-7■■■□□ 16.7
MATR3P43243 TULP4-207ENST00000620026 680 ntTSL 423.26■■□□□ 1.312e-6■■■□□ 16.7
MATR3P43243 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.12e-7■■■□□ 16.7
MATR3P43243 ZNF280B-202ENST00000619852 3981 ntTSL 1 (best)9.23□□□□□ -0.932e-7■■■□□ 16.7
MATR3P43243 MED15-218ENST00000451058 418 ntTSL 320.91■□□□□ 0.943e-6■■■□□ 16.6
MATR3P43243 MED15-216ENST00000445189 596 ntTSL 417.78■□□□□ 0.443e-6■■■□□ 16.6
MATR3P43243 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-6■■■□□ 16.6
MATR3P43243 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.34■■□□□ 1.651e-6■■■□□ 16.6
MATR3P43243 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.49■■□□□ 1.511e-6■■■□□ 16.6
MATR3P43243 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.511e-6■■■□□ 16.6
MATR3P43243 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.141e-6■■■□□ 16.6
MATR3P43243 HMGA2-209ENST00000539662 485 ntTSL 311.71□□□□□ -0.531e-6■■■□□ 16.6
MATR3P43243 MNAT1-209ENST00000557134 680 ntTSL 33.69□□□□□ -1.823e-6■■■□□ 16.6
Retrieved 100 of 16,209 protein–RNA pairs in 104.3 ms