RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 PELP1Q8IZL8 1130 aaKnown RBP6.64□□□□□ -1.35
PPP1R9A-208ENST00000456331 MYT1Q01538 1121 aa6.41□□□□□ -1.38
PPP1R9A-208ENST00000456331 DCAF8L2P0C7V8 631 aa6.35□□□□□ -1.39
PPP1R9A-208ENST00000456331 NISCHQ9Y2I1 1504 aa6.34□□□□□ -1.39
PPP1R9A-208ENST00000456331 FAM9AQ8IZU1 332 aaPredicted RBP6.32□□□□□ -1.4
PPP1R9A-208ENST00000456331 CCER1Q8TC90 406 aaPredicted RBP6.32□□□□□ -1.4
PPP1R9A-208ENST00000456331 ZEB1P37275 1124 aaPredicted RBP6.25□□□□□ -1.41
PPP1R9A-208ENST00000456331 APLP2Q06481 763 aa6.23□□□□□ -1.41
PPP1R9A-208ENST00000456331 CENPBP07199 599 aaPredicted RBP6.18□□□□□ -1.42
PPP1R9A-208ENST00000456331 YTHDC1Q96MU7 727 aaKnown RBP6.14□□□□□ -1.43
PPP1R9A-208ENST00000456331 ERICH6Q7L0X2 663 aa6.12□□□□□ -1.43
PPP1R9A-208ENST00000456331 SUPT5HO00267 1087 aaKnown RBP6.11□□□□□ -1.43
PPP1R9A-208ENST00000456331 NEFLP07196 543 aa6.02□□□□□ -1.45
PPP1R9A-208ENST00000456331 TTBK1Q5TCY1 1321 aaPredicted RBP5.95□□□□□ -1.46
PPP1R9A-208ENST00000456331 DAXXQ9UER7 740 aaPredicted RBP5.89□□□□□ -1.47
PPP1R9A-208ENST00000456331 SHROOM4Q9ULL8 1493 aa5.86□□□□□ -1.47
PPP1R9A-208ENST00000456331 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
PPP1R9A-208ENST00000456331 PCGF6Q9BYE7 350 aa5.83□□□□□ -1.48
PPP1R9A-208ENST00000456331 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
PPP1R9A-208ENST00000456331 CLSPNQ9HAW4 1339 aa5.78□□□□□ -1.48
PPP1R9A-208ENST00000456331 UBTFP17480 764 aaKnown RBP5.76□□□□□ -1.49
PPP1R9A-208ENST00000456331 RTL5Q5HYW3 569 aaPredicted RBP5.76□□□□□ -1.49
PPP1R9A-208ENST00000456331 MYT1LQ9UL68 1186 aa5.74□□□□□ -1.49
PPP1R9A-208ENST00000456331 ZNF316A6NFI3 1004 aaPredicted RBP5.71□□□□□ -1.5
PPP1R9A-208ENST00000456331 HRCP23327 699 aa5.68□□□□□ -1.5
PPP1R9A-208ENST00000456331 ATP1B4Q9UN42 357 aaPredicted RBP5.68□□□□□ -1.5
PPP1R9A-208ENST00000456331 NEFMP07197 916 aa5.67□□□□□ -1.5
PPP1R9A-208ENST00000456331 EHMT2Q96KQ7 1210 aa5.66□□□□□ -1.5
PPP1R9A-208ENST00000456331 ACIN1Q9UKV3 1341 aaKnown RBP5.66□□□□□ -1.5
PPP1R9A-208ENST00000456331 ZBTB47Q9UFB7 747 aaPredicted RBP5.62□□□□□ -1.51
PPP1R9A-208ENST00000456331 GLIPR1L2Q4G1C9 344 aa5.62□□□□□ -1.51
PPP1R9A-208ENST00000456331 CDK11AQ9UQ88 783 aaPredicted RBP5.6□□□□□ -1.51
PPP1R9A-208ENST00000456331 ANP32BQ92688 251 aaKnown RBP5.59□□□□□ -1.52
PPP1R9A-208ENST00000456331 CCDC180Q9P1Z9 1646 aa5.58□□□□□ -1.52
PPP1R9A-208ENST00000456331 EIF5BO60841 1220 aaKnown RBP5.58□□□□□ -1.52
PPP1R9A-208ENST00000456331 DIEXFQ68CQ4 756 aaKnown RBP5.57□□□□□ -1.52
PPP1R9A-208ENST00000456331 ANP32CO43423 234 aa5.56□□□□□ -1.52
PPP1R9A-208ENST00000456331 ANP32AP39687 249 aaKnown RBP5.54□□□□□ -1.52
PPP1R9A-208ENST00000456331 ANP32EQ9BTT0 268 aa5.54□□□□□ -1.52
PPP1R9A-208ENST00000456331 RANGAP1P46060 587 aaPredicted RBP5.52□□□□□ -1.53
PPP1R9A-208ENST00000456331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.52□□□□□ -1.53
PPP1R9A-208ENST00000456331 HNRNPUL2Q1KMD3 747 aaKnown RBP5.52□□□□□ -1.53
PPP1R9A-208ENST00000456331 UPF2Q9HAU5 1272 aaKnown RBP5.51□□□□□ -1.53
PPP1R9A-208ENST00000456331 MYO15BQ96JP2 1530 aa5.51□□□□□ -1.53
PPP1R9A-208ENST00000456331 DCAF1Q9Y4B6 1507 aa5.49□□□□□ -1.53
PPP1R9A-208ENST00000456331 CHIC1Q5VXU3 224 aa5.48□□□□□ -1.53
PPP1R9A-208ENST00000456331 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.47□□□□□ -1.53
PPP1R9A-208ENST00000456331 POLR3GLQ9BT43 218 aa5.46□□□□□ -1.53
PPP1R9A-208ENST00000456331 CANXP27824 592 aaKnown RBP5.45□□□□□ -1.54
PPP1R9A-208ENST00000456331 SLC4A1APQ9BWU0 796 aaKnown RBP5.44□□□□□ -1.54
PPP1R9A-208ENST00000456331 TRIM52Q96A61 297 aa5.43□□□□□ -1.54
PPP1R9A-208ENST00000456331 ITGAEP38570 1179 aa5.43□□□□□ -1.54
PPP1R9A-208ENST00000456331 FAM50AQ14320 339 aaKnown RBP5.42□□□□□ -1.54
PPP1R9A-208ENST00000456331 SLC24A1O60721 1099 aa5.42□□□□□ -1.54
PPP1R9A-208ENST00000456331 DDRGK1Q96HY6 314 aa5.41□□□□□ -1.54
PPP1R9A-208ENST00000456331 HSP90AA1P07900 732 aaKnown RBP5.4□□□□□ -1.54
PPP1R9A-208ENST00000456331 TNNT2P45379 298 aaPredicted RBP5.4□□□□□ -1.55
PPP1R9A-208ENST00000456331 CFAP44Q96MT7 982 aa5.39□□□□□ -1.55
PPP1R9A-208ENST00000456331 EEA1Q15075 1411 aa5.39□□□□□ -1.55
PPP1R9A-208ENST00000456331 TRIM44Q96DX7 344 aaPredicted RBP5.38□□□□□ -1.55
PPP1R9A-208ENST00000456331 GTF3C3Q9Y5Q9 886 aa5.38□□□□□ -1.55
PPP1R9A-208ENST00000456331 CHMP4BQ9H444 224 aaKnown RBP5.38□□□□□ -1.55
PPP1R9A-208ENST00000456331 BECN1Q14457 450 aa5.38□□□□□ -1.55
PPP1R9A-208ENST00000456331 NEUROD1Q13562 356 aa5.37□□□□□ -1.55
PPP1R9A-208ENST00000456331 CDK11BP21127 795 aaKnown RBP5.37□□□□□ -1.55
PPP1R9A-208ENST00000456331 TONSLQ96HA7 1378 aa5.37□□□□□ -1.55
PPP1R9A-208ENST00000456331 GOLGA6L22H0YM25 854 aa5.37□□□□□ -1.55
PPP1R9A-208ENST00000456331 ARID4BQ4LE39 1312 aaPredicted RBP5.36□□□□□ -1.55
PPP1R9A-208ENST00000456331 NCLP19338 710 aaKnown RBP5.35□□□□□ -1.55
PPP1R9A-208ENST00000456331 MYH16Q9H6N6 1097 aa5.35□□□□□ -1.55
PPP1R9A-208ENST00000456331 CDCA8Q53HL2 280 aa5.34□□□□□ -1.55
PPP1R9A-208ENST00000456331 CSRNP3Q8WYN3 585 aa5.33□□□□□ -1.56
PPP1R9A-208ENST00000456331 PTMSP20962 102 aa5.33□□□□□ -1.56
PPP1R9A-208ENST00000456331 MS4A1P11836 297 aa5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 ERICH6BQ5W0A0 696 aa5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 LOC105371045A0A1W2PR82 267 aa5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 PPM1GO15355 546 aaPredicted RBP5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 L1TD1Q5T7N2 865 aaKnown RBP5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 RSF1Q96T23 1441 aaPredicted RBP5.32□□□□□ -1.56
PPP1R9A-208ENST00000456331 CASC1Q6TDU7 716 aa5.31□□□□□ -1.56
PPP1R9A-208ENST00000456331 ESF1Q9H501 851 aaKnown RBP5.31□□□□□ -1.56
PPP1R9A-208ENST00000456331 NRDCO43847 1150 aa5.31□□□□□ -1.56
PPP1R9A-208ENST00000456331 GOLGA6L6A8MZA4 724 aa5.31□□□□□ -1.56
PPP1R9A-208ENST00000456331 PPARGC1BQ86YN6 1023 aaKnown RBP5.31□□□□□ -1.56
PPP1R9A-208ENST00000456331 WDR43Q15061 677 aaKnown RBP eCLIP5.3□□□□□ -1.56
PPP1R9A-208ENST00000456331 CCDC136Q96JN2 1154 aa5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 USP35Q9P2H5 1018 aa5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 TIMELESSQ9UNS1 1208 aa5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 HAP1P54257 671 aaPredicted RBP5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 TMC1Q8TDI8 760 aa5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 PNNQ9H307 717 aaKnown RBP5.29□□□□□ -1.56
PPP1R9A-208ENST00000456331 ZRSR1Q15695 479 aaKnown RBP5.28□□□□□ -1.56
PPP1R9A-208ENST00000456331 CHMP4AQ9BY43 222 aa5.27□□□□□ -1.57
PPP1R9A-208ENST00000456331 NPM1P06748 294 aaKnown RBP eCLIP5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 ZCCHC6Q5VYS8 1495 aaKnown RBP5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 HNRNPUQ00839 825 aaKnown RBP eCLIP5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 ZNF326Q5BKZ1 582 aaKnown RBP5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 TSPY4P0CV99 314 aa5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 TSPY10P0CW01 314 aa5.26□□□□□ -1.57
PPP1R9A-208ENST00000456331 FKBP8Q14318 412 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms