RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
EFCAB11-213ENST00000557685 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
EFCAB11-213ENST00000557685 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
EFCAB11-213ENST00000557685 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
EFCAB11-213ENST00000557685 FOXD1Q16676 465 aa17.61■□□□□ 0.41
EFCAB11-213ENST00000557685 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
EFCAB11-213ENST00000557685 MSH5O43196 834 aa16.56■□□□□ 0.24
EFCAB11-213ENST00000557685 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
EFCAB11-213ENST00000557685 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
EFCAB11-213ENST00000557685 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
EFCAB11-213ENST00000557685 ADRA2BP18089 450 aa16.33■□□□□ 0.2
EFCAB11-213ENST00000557685 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
EFCAB11-213ENST00000557685 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
EFCAB11-213ENST00000557685 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
EFCAB11-213ENST00000557685 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
EFCAB11-213ENST00000557685 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
EFCAB11-213ENST00000557685 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
EFCAB11-213ENST00000557685 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
EFCAB11-213ENST00000557685 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
EFCAB11-213ENST00000557685 KCNA4P22459 653 aa14.24□□□□□ -0.13
EFCAB11-213ENST00000557685 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
EFCAB11-213ENST00000557685 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
EFCAB11-213ENST00000557685 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
EFCAB11-213ENST00000557685 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
EFCAB11-213ENST00000557685 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
EFCAB11-213ENST00000557685 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
EFCAB11-213ENST00000557685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
EFCAB11-213ENST00000557685 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-213ENST00000557685 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
EFCAB11-213ENST00000557685 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
EFCAB11-213ENST00000557685 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
EFCAB11-213ENST00000557685 CAPN15O75808 1086 aa13.27□□□□□ -0.29
EFCAB11-213ENST00000557685 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
EFCAB11-213ENST00000557685 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
EFCAB11-213ENST00000557685 DSG3P32926 999 aa13.15□□□□□ -0.3
EFCAB11-213ENST00000557685 ZBTB22O15209 634 aa13.09□□□□□ -0.31
EFCAB11-213ENST00000557685 APLP2Q06481 763 aa13.06□□□□□ -0.32
EFCAB11-213ENST00000557685 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
EFCAB11-213ENST00000557685 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
EFCAB11-213ENST00000557685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
EFCAB11-213ENST00000557685 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
EFCAB11-213ENST00000557685 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
EFCAB11-213ENST00000557685 ABCB7O75027 752 aa12.94□□□□□ -0.34
EFCAB11-213ENST00000557685 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
EFCAB11-213ENST00000557685 POTEHQ6S545 545 aa12.8□□□□□ -0.36
EFCAB11-213ENST00000557685 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
EFCAB11-213ENST00000557685 POLA2Q14181 598 aa12.61□□□□□ -0.39
EFCAB11-213ENST00000557685 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
EFCAB11-213ENST00000557685 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
EFCAB11-213ENST00000557685 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
EFCAB11-213ENST00000557685 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
EFCAB11-213ENST00000557685 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
EFCAB11-213ENST00000557685 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
EFCAB11-213ENST00000557685 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
EFCAB11-213ENST00000557685 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
EFCAB11-213ENST00000557685 FBLN2P98095 1184 aa12.03□□□□□ -0.48
EFCAB11-213ENST00000557685 FKBP8Q14318 412 aa12.03□□□□□ -0.48
EFCAB11-213ENST00000557685 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
EFCAB11-213ENST00000557685 PITPNM1O00562 1244 aa12.01□□□□□ -0.49
EFCAB11-213ENST00000557685 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
EFCAB11-213ENST00000557685 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
EFCAB11-213ENST00000557685 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
EFCAB11-213ENST00000557685 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-213ENST00000557685 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
EFCAB11-213ENST00000557685 HAX1O00165 279 aa11.89□□□□□ -0.51
EFCAB11-213ENST00000557685 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
EFCAB11-213ENST00000557685 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
EFCAB11-213ENST00000557685 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
EFCAB11-213ENST00000557685 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
EFCAB11-213ENST00000557685 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
EFCAB11-213ENST00000557685 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-213ENST00000557685 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
EFCAB11-213ENST00000557685 EVX2Q03828 476 aa11.66□□□□□ -0.54
EFCAB11-213ENST00000557685 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
EFCAB11-213ENST00000557685 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
EFCAB11-213ENST00000557685 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
EFCAB11-213ENST00000557685 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
EFCAB11-213ENST00000557685 PROM2Q8N271 834 aa11.57□□□□□ -0.56
EFCAB11-213ENST00000557685 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-213ENST00000557685 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
EFCAB11-213ENST00000557685 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
EFCAB11-213ENST00000557685 GABBR2O75899 941 aa11.43□□□□□ -0.58
EFCAB11-213ENST00000557685 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
EFCAB11-213ENST00000557685 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
EFCAB11-213ENST00000557685 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
EFCAB11-213ENST00000557685 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
EFCAB11-213ENST00000557685 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-213ENST00000557685 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
EFCAB11-213ENST00000557685 LHX8Q68G74 356 aa11.22□□□□□ -0.61
EFCAB11-213ENST00000557685 CLCN6P51797 869 aa11.2□□□□□ -0.62
EFCAB11-213ENST00000557685 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
EFCAB11-213ENST00000557685 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
EFCAB11-213ENST00000557685 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
EFCAB11-213ENST00000557685 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
EFCAB11-213ENST00000557685 PAK3O75914 559 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-213ENST00000557685 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
EFCAB11-213ENST00000557685 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
EFCAB11-213ENST00000557685 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
EFCAB11-213ENST00000557685 MIER1Q8N108 512 aa11.07□□□□□ -0.64
EFCAB11-213ENST00000557685 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms