RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
EFCAB11-208ENST00000555872 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
EFCAB11-208ENST00000555872 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
EFCAB11-208ENST00000555872 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
EFCAB11-208ENST00000555872 MYT1Q01538 1121 aa18.33■□□□□ 0.53
EFCAB11-208ENST00000555872 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
EFCAB11-208ENST00000555872 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
EFCAB11-208ENST00000555872 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
EFCAB11-208ENST00000555872 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.43
EFCAB11-208ENST00000555872 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
EFCAB11-208ENST00000555872 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
EFCAB11-208ENST00000555872 APLP2Q06481 763 aa17.34■□□□□ 0.37
EFCAB11-208ENST00000555872 HRCP23327 699 aa17.23■□□□□ 0.35
EFCAB11-208ENST00000555872 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
EFCAB11-208ENST00000555872 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
EFCAB11-208ENST00000555872 ABCC9O60706 1549 aa17.05■□□□□ 0.32
EFCAB11-208ENST00000555872 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
EFCAB11-208ENST00000555872 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
EFCAB11-208ENST00000555872 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
EFCAB11-208ENST00000555872 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
EFCAB11-208ENST00000555872 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
EFCAB11-208ENST00000555872 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
EFCAB11-208ENST00000555872 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
EFCAB11-208ENST00000555872 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.28
EFCAB11-208ENST00000555872 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
EFCAB11-208ENST00000555872 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
EFCAB11-208ENST00000555872 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
EFCAB11-208ENST00000555872 CUX2O14529 1486 aa16.66■□□□□ 0.26
EFCAB11-208ENST00000555872 NACADO15069 1562 aa16.51■□□□□ 0.23
EFCAB11-208ENST00000555872 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
EFCAB11-208ENST00000555872 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.22
EFCAB11-208ENST00000555872 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
EFCAB11-208ENST00000555872 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
EFCAB11-208ENST00000555872 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.19
EFCAB11-208ENST00000555872 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
EFCAB11-208ENST00000555872 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
EFCAB11-208ENST00000555872 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
EFCAB11-208ENST00000555872 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
EFCAB11-208ENST00000555872 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
EFCAB11-208ENST00000555872 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
EFCAB11-208ENST00000555872 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
EFCAB11-208ENST00000555872 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
EFCAB11-208ENST00000555872 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
EFCAB11-208ENST00000555872 NEUROD1Q13562 356 aa15.96■□□□□ 0.14
EFCAB11-208ENST00000555872 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
EFCAB11-208ENST00000555872 ADRA2BP18089 450 aa15.94■□□□□ 0.14
EFCAB11-208ENST00000555872 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
EFCAB11-208ENST00000555872 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
EFCAB11-208ENST00000555872 KCNA4P22459 653 aa15.89■□□□□ 0.13
EFCAB11-208ENST00000555872 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
EFCAB11-208ENST00000555872 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
EFCAB11-208ENST00000555872 UBE2Q2Q8WVN8 375 aa15.8■□□□□ 0.12
EFCAB11-208ENST00000555872 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.11
EFCAB11-208ENST00000555872 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
EFCAB11-208ENST00000555872 PODXL2Q9NZ53 605 aa15.75■□□□□ 0.11
EFCAB11-208ENST00000555872 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
EFCAB11-208ENST00000555872 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
EFCAB11-208ENST00000555872 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
EFCAB11-208ENST00000555872 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
EFCAB11-208ENST00000555872 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
EFCAB11-208ENST00000555872 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
EFCAB11-208ENST00000555872 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
EFCAB11-208ENST00000555872 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
EFCAB11-208ENST00000555872 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
EFCAB11-208ENST00000555872 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
EFCAB11-208ENST00000555872 PKNOX2Q96KN3 472 aa15.51■□□□□ 0.07
EFCAB11-208ENST00000555872 WIZO95785 1651 aa15.47■□□□□ 0.07
EFCAB11-208ENST00000555872 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
EFCAB11-208ENST00000555872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
EFCAB11-208ENST00000555872 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
EFCAB11-208ENST00000555872 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
EFCAB11-208ENST00000555872 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
EFCAB11-208ENST00000555872 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
EFCAB11-208ENST00000555872 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
EFCAB11-208ENST00000555872 CCDC136Q96JN2 1154 aa15.33■□□□□ 0.05
EFCAB11-208ENST00000555872 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
EFCAB11-208ENST00000555872 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
EFCAB11-208ENST00000555872 TIMELESSQ9UNS1 1208 aa15.26■□□□□ 0.03
EFCAB11-208ENST00000555872 ARXQ96QS3 562 aa15.25■□□□□ 0.03
EFCAB11-208ENST00000555872 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
EFCAB11-208ENST00000555872 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
EFCAB11-208ENST00000555872 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
EFCAB11-208ENST00000555872 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
EFCAB11-208ENST00000555872 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
EFCAB11-208ENST00000555872 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
EFCAB11-208ENST00000555872 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
EFCAB11-208ENST00000555872 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
EFCAB11-208ENST00000555872 PDE4CQ08493 712 aa15.15■□□□□ 0.02
EFCAB11-208ENST00000555872 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
EFCAB11-208ENST00000555872 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
EFCAB11-208ENST00000555872 MIER1Q8N108 512 aa15.13■□□□□ 0.01
EFCAB11-208ENST00000555872 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
EFCAB11-208ENST00000555872 NEFLP07196 543 aa15.06■□□□□ 0
EFCAB11-208ENST00000555872 SUPT16HQ9Y5B9 1047 aaKnown RBP15.04■□□□□ -0
EFCAB11-208ENST00000555872 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
EFCAB11-208ENST00000555872 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
EFCAB11-208ENST00000555872 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
EFCAB11-208ENST00000555872 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
EFCAB11-208ENST00000555872 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
EFCAB11-208ENST00000555872 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms