RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
EFCAB11-210ENST00000556078 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
EFCAB11-210ENST00000556078 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
EFCAB11-210ENST00000556078 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
EFCAB11-210ENST00000556078 FOXD1Q16676 465 aa18.19■□□□□ 0.5
EFCAB11-210ENST00000556078 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
EFCAB11-210ENST00000556078 MSH5O43196 834 aa17.27■□□□□ 0.36
EFCAB11-210ENST00000556078 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
EFCAB11-210ENST00000556078 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
EFCAB11-210ENST00000556078 ADRA2BP18089 450 aa16.44■□□□□ 0.22
EFCAB11-210ENST00000556078 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
EFCAB11-210ENST00000556078 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
EFCAB11-210ENST00000556078 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
EFCAB11-210ENST00000556078 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
EFCAB11-210ENST00000556078 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
EFCAB11-210ENST00000556078 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
EFCAB11-210ENST00000556078 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
EFCAB11-210ENST00000556078 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
EFCAB11-210ENST00000556078 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
EFCAB11-210ENST00000556078 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
EFCAB11-210ENST00000556078 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
EFCAB11-210ENST00000556078 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
EFCAB11-210ENST00000556078 POTEHQ6S545 545 aa13.99□□□□□ -0.17
EFCAB11-210ENST00000556078 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
EFCAB11-210ENST00000556078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
EFCAB11-210ENST00000556078 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
EFCAB11-210ENST00000556078 CAPN15O75808 1086 aa13.53□□□□□ -0.24
EFCAB11-210ENST00000556078 DSG3P32926 999 aa13.52□□□□□ -0.25
EFCAB11-210ENST00000556078 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
EFCAB11-210ENST00000556078 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
EFCAB11-210ENST00000556078 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
EFCAB11-210ENST00000556078 ABCB7O75027 752 aa13.16□□□□□ -0.3
EFCAB11-210ENST00000556078 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
EFCAB11-210ENST00000556078 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
EFCAB11-210ENST00000556078 APLP2Q06481 763 aa12.99□□□□□ -0.33
EFCAB11-210ENST00000556078 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
EFCAB11-210ENST00000556078 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
EFCAB11-210ENST00000556078 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
EFCAB11-210ENST00000556078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
EFCAB11-210ENST00000556078 KCNA4P22459 653 aa12.81□□□□□ -0.36
EFCAB11-210ENST00000556078 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
EFCAB11-210ENST00000556078 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-210ENST00000556078 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
EFCAB11-210ENST00000556078 POLA2Q14181 598 aa12.61□□□□□ -0.39
EFCAB11-210ENST00000556078 HAX1O00165 279 aa12.49□□□□□ -0.41
EFCAB11-210ENST00000556078 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
EFCAB11-210ENST00000556078 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
EFCAB11-210ENST00000556078 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
EFCAB11-210ENST00000556078 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-210ENST00000556078 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
EFCAB11-210ENST00000556078 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
EFCAB11-210ENST00000556078 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-210ENST00000556078 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
EFCAB11-210ENST00000556078 EVX2Q03828 476 aa12.23□□□□□ -0.45
EFCAB11-210ENST00000556078 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
EFCAB11-210ENST00000556078 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
EFCAB11-210ENST00000556078 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-210ENST00000556078 LHX8Q68G74 356 aa12.02□□□□□ -0.49
EFCAB11-210ENST00000556078 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-210ENST00000556078 GABBR2O75899 941 aa11.92□□□□□ -0.5
EFCAB11-210ENST00000556078 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
EFCAB11-210ENST00000556078 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
EFCAB11-210ENST00000556078 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
EFCAB11-210ENST00000556078 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
EFCAB11-210ENST00000556078 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
EFCAB11-210ENST00000556078 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
EFCAB11-210ENST00000556078 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
EFCAB11-210ENST00000556078 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
EFCAB11-210ENST00000556078 ZBTB22O15209 634 aa11.78□□□□□ -0.52
EFCAB11-210ENST00000556078 FBLN2P98095 1184 aa11.72□□□□□ -0.53
EFCAB11-210ENST00000556078 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
EFCAB11-210ENST00000556078 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
EFCAB11-210ENST00000556078 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
EFCAB11-210ENST00000556078 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
EFCAB11-210ENST00000556078 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
EFCAB11-210ENST00000556078 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
EFCAB11-210ENST00000556078 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-210ENST00000556078 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
EFCAB11-210ENST00000556078 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
EFCAB11-210ENST00000556078 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
EFCAB11-210ENST00000556078 CLCN6P51797 869 aa11.42□□□□□ -0.58
EFCAB11-210ENST00000556078 POTEMA6NI47 508 aa11.36□□□□□ -0.59
EFCAB11-210ENST00000556078 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
EFCAB11-210ENST00000556078 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
EFCAB11-210ENST00000556078 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
EFCAB11-210ENST00000556078 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
EFCAB11-210ENST00000556078 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
EFCAB11-210ENST00000556078 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
EFCAB11-210ENST00000556078 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
EFCAB11-210ENST00000556078 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
EFCAB11-210ENST00000556078 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
EFCAB11-210ENST00000556078 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
EFCAB11-210ENST00000556078 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
EFCAB11-210ENST00000556078 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
EFCAB11-210ENST00000556078 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
EFCAB11-210ENST00000556078 METRNQ9UJH8 293 aa11.01□□□□□ -0.65
EFCAB11-210ENST00000556078 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
EFCAB11-210ENST00000556078 MAMSTRQ6ZN01 415 aa10.96□□□□□ -0.65
EFCAB11-210ENST00000556078 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
EFCAB11-210ENST00000556078 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms