RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
EFCAB11-201ENST00000316738 CCDC180Q9P1Z9 1646 aa21.27■■□□□ 1
EFCAB11-201ENST00000316738 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
EFCAB11-201ENST00000316738 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
EFCAB11-201ENST00000316738 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
EFCAB11-201ENST00000316738 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
EFCAB11-201ENST00000316738 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
EFCAB11-201ENST00000316738 ABCC9O60706 1549 aa19.74■□□□□ 0.75
EFCAB11-201ENST00000316738 NACADO15069 1562 aa19.71■□□□□ 0.75
EFCAB11-201ENST00000316738 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
EFCAB11-201ENST00000316738 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
EFCAB11-201ENST00000316738 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
EFCAB11-201ENST00000316738 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
EFCAB11-201ENST00000316738 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
EFCAB11-201ENST00000316738 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
EFCAB11-201ENST00000316738 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
EFCAB11-201ENST00000316738 MROH2BQ7Z745 1585 aa18.95■□□□□ 0.62
EFCAB11-201ENST00000316738 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
EFCAB11-201ENST00000316738 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
EFCAB11-201ENST00000316738 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
EFCAB11-201ENST00000316738 WIZO95785 1651 aa18.81■□□□□ 0.6
EFCAB11-201ENST00000316738 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
EFCAB11-201ENST00000316738 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
EFCAB11-201ENST00000316738 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
EFCAB11-201ENST00000316738 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
EFCAB11-201ENST00000316738 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-201ENST00000316738 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
EFCAB11-201ENST00000316738 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
EFCAB11-201ENST00000316738 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
EFCAB11-201ENST00000316738 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
EFCAB11-201ENST00000316738 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
EFCAB11-201ENST00000316738 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
EFCAB11-201ENST00000316738 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
EFCAB11-201ENST00000316738 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
EFCAB11-201ENST00000316738 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.49
EFCAB11-201ENST00000316738 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
EFCAB11-201ENST00000316738 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
EFCAB11-201ENST00000316738 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
EFCAB11-201ENST00000316738 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
EFCAB11-201ENST00000316738 CFTRP13569 1480 aa17.87■□□□□ 0.45
EFCAB11-201ENST00000316738 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
EFCAB11-201ENST00000316738 EEA1Q15075 1411 aa17.83■□□□□ 0.45
EFCAB11-201ENST00000316738 SOGA1O94964 1423 aa17.83■□□□□ 0.44
EFCAB11-201ENST00000316738 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
EFCAB11-201ENST00000316738 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
EFCAB11-201ENST00000316738 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.43
EFCAB11-201ENST00000316738 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.42
EFCAB11-201ENST00000316738 CUX1P39880 1505 aa17.7■□□□□ 0.42
EFCAB11-201ENST00000316738 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
EFCAB11-201ENST00000316738 KIF21BO75037 1637 aa17.64■□□□□ 0.41
EFCAB11-201ENST00000316738 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
EFCAB11-201ENST00000316738 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
EFCAB11-201ENST00000316738 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
EFCAB11-201ENST00000316738 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
EFCAB11-201ENST00000316738 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
EFCAB11-201ENST00000316738 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
EFCAB11-201ENST00000316738 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
EFCAB11-201ENST00000316738 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
EFCAB11-201ENST00000316738 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
EFCAB11-201ENST00000316738 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
EFCAB11-201ENST00000316738 NESP48681 1621 aa17.47■□□□□ 0.39
EFCAB11-201ENST00000316738 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
EFCAB11-201ENST00000316738 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.38
EFCAB11-201ENST00000316738 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
EFCAB11-201ENST00000316738 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
EFCAB11-201ENST00000316738 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
EFCAB11-201ENST00000316738 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
EFCAB11-201ENST00000316738 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
EFCAB11-201ENST00000316738 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
EFCAB11-201ENST00000316738 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
EFCAB11-201ENST00000316738 CUX2O14529 1486 aa17.32■□□□□ 0.36
EFCAB11-201ENST00000316738 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
EFCAB11-201ENST00000316738 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
EFCAB11-201ENST00000316738 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
EFCAB11-201ENST00000316738 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
EFCAB11-201ENST00000316738 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
EFCAB11-201ENST00000316738 IGF1RP08069 1367 aa17.3■□□□□ 0.36
EFCAB11-201ENST00000316738 CLIP1P30622 1438 aa17.3■□□□□ 0.36
EFCAB11-201ENST00000316738 HRCP23327 699 aa17.29■□□□□ 0.36
EFCAB11-201ENST00000316738 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
EFCAB11-201ENST00000316738 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
EFCAB11-201ENST00000316738 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
EFCAB11-201ENST00000316738 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
EFCAB11-201ENST00000316738 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
EFCAB11-201ENST00000316738 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
EFCAB11-201ENST00000316738 CUL7Q14999 1698 aa17.16■□□□□ 0.34
EFCAB11-201ENST00000316738 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-201ENST00000316738 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
EFCAB11-201ENST00000316738 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
EFCAB11-201ENST00000316738 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
EFCAB11-201ENST00000316738 WDR62O43379 1518 aa17.06■□□□□ 0.32
EFCAB11-201ENST00000316738 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
EFCAB11-201ENST00000316738 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
EFCAB11-201ENST00000316738 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
EFCAB11-201ENST00000316738 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
EFCAB11-201ENST00000316738 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
EFCAB11-201ENST00000316738 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
EFCAB11-201ENST00000316738 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
EFCAB11-201ENST00000316738 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
EFCAB11-201ENST00000316738 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms