RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-204ENST00000553871 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
EFCAB11-204ENST00000553871 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
EFCAB11-204ENST00000553871 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
EFCAB11-204ENST00000553871 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
EFCAB11-204ENST00000553871 FOXD1Q16676 465 aa12.79□□□□□ -0.36
EFCAB11-204ENST00000553871 ADRA2BP18089 450 aa12.53□□□□□ -0.4
EFCAB11-204ENST00000553871 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
EFCAB11-204ENST00000553871 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
EFCAB11-204ENST00000553871 KCNA4P22459 653 aa11.79□□□□□ -0.52
EFCAB11-204ENST00000553871 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
EFCAB11-204ENST00000553871 MSH5O43196 834 aa11.75□□□□□ -0.53
EFCAB11-204ENST00000553871 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
EFCAB11-204ENST00000553871 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-204ENST00000553871 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
EFCAB11-204ENST00000553871 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-204ENST00000553871 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
EFCAB11-204ENST00000553871 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
EFCAB11-204ENST00000553871 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
EFCAB11-204ENST00000553871 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-204ENST00000553871 DMRT2Q9Y5R5 561 aa11.09□□□□□ -0.63
EFCAB11-204ENST00000553871 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
EFCAB11-204ENST00000553871 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
EFCAB11-204ENST00000553871 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
EFCAB11-204ENST00000553871 ZBTB22O15209 634 aa10.82□□□□□ -0.68
EFCAB11-204ENST00000553871 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
EFCAB11-204ENST00000553871 POTEDQ86YR6 584 aa10.76□□□□□ -0.69
EFCAB11-204ENST00000553871 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
EFCAB11-204ENST00000553871 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
EFCAB11-204ENST00000553871 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
EFCAB11-204ENST00000553871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.53□□□□□ -0.72
EFCAB11-204ENST00000553871 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
EFCAB11-204ENST00000553871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
EFCAB11-204ENST00000553871 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
EFCAB11-204ENST00000553871 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
EFCAB11-204ENST00000553871 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
EFCAB11-204ENST00000553871 APLP2Q06481 763 aa10.21□□□□□ -0.77
EFCAB11-204ENST00000553871 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
EFCAB11-204ENST00000553871 RNF39Q9H2S5 420 aa10.05□□□□□ -0.8
EFCAB11-204ENST00000553871 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-204ENST00000553871 FKBP8Q14318 412 aa9.99□□□□□ -0.81
EFCAB11-204ENST00000553871 TRHP20396 242 aaPredicted RBP9.98□□□□□ -0.81
EFCAB11-204ENST00000553871 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
EFCAB11-204ENST00000553871 CAPN15O75808 1086 aa9.97□□□□□ -0.81
EFCAB11-204ENST00000553871 SPINK5Q9NQ38 1064 aaPredicted RBP9.94□□□□□ -0.82
EFCAB11-204ENST00000553871 FBLN2P98095 1184 aa9.83□□□□□ -0.84
EFCAB11-204ENST00000553871 POLA2Q14181 598 aa9.83□□□□□ -0.84
EFCAB11-204ENST00000553871 CACNB1Q02641 598 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-204ENST00000553871 ABCB7O75027 752 aa9.78□□□□□ -0.84
EFCAB11-204ENST00000553871 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
EFCAB11-204ENST00000553871 MKRN4PQ13434 485 aaPredicted RBP9.73□□□□□ -0.85
EFCAB11-204ENST00000553871 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
EFCAB11-204ENST00000553871 DSG3P32926 999 aa9.65□□□□□ -0.86
EFCAB11-204ENST00000553871 AMER1Q5JTC6 1135 aaPredicted RBP9.59□□□□□ -0.87
EFCAB11-204ENST00000553871 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
EFCAB11-204ENST00000553871 RTN4Q9NQC3 1192 aaKnown RBP9.53□□□□□ -0.88
EFCAB11-204ENST00000553871 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
EFCAB11-204ENST00000553871 PROM2Q8N271 834 aa9.51□□□□□ -0.89
EFCAB11-204ENST00000553871 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-204ENST00000553871 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
EFCAB11-204ENST00000553871 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
EFCAB11-204ENST00000553871 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
EFCAB11-204ENST00000553871 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
EFCAB11-204ENST00000553871 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
EFCAB11-204ENST00000553871 PABPN1Q86U42 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
EFCAB11-204ENST00000553871 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
EFCAB11-204ENST00000553871 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.93
EFCAB11-204ENST00000553871 RBM42Q9BTD8 480 aaKnown RBP9.27□□□□□ -0.93
EFCAB11-204ENST00000553871 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
EFCAB11-204ENST00000553871 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
EFCAB11-204ENST00000553871 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
EFCAB11-204ENST00000553871 MIER1Q8N108 512 aa9.21□□□□□ -0.94
EFCAB11-204ENST00000553871 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
EFCAB11-204ENST00000553871 AKT1S1Q96B36 256 aa9.17□□□□□ -0.94
EFCAB11-204ENST00000553871 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
EFCAB11-204ENST00000553871 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
EFCAB11-204ENST00000553871 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
EFCAB11-204ENST00000553871 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
EFCAB11-204ENST00000553871 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
EFCAB11-204ENST00000553871 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
EFCAB11-204ENST00000553871 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
EFCAB11-204ENST00000553871 PKD2Q13563 968 aa9.05□□□□□ -0.96
EFCAB11-204ENST00000553871 ECM2O94769 699 aaPredicted RBP9.02□□□□□ -0.97
EFCAB11-204ENST00000553871 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
EFCAB11-204ENST00000553871 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
EFCAB11-204ENST00000553871 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
EFCAB11-204ENST00000553871 GSE1Q14687 1217 aa8.92□□□□□ -0.98
EFCAB11-204ENST00000553871 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
EFCAB11-204ENST00000553871 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
EFCAB11-204ENST00000553871 FAM212AQ96EL1 285 aa8.89□□□□□ -0.99
EFCAB11-204ENST00000553871 RGL2O15211 777 aa8.88□□□□□ -0.99
EFCAB11-204ENST00000553871 NPM1P06748 294 aaKnown RBP eCLIP8.88□□□□□ -0.99
EFCAB11-204ENST00000553871 NUBP1P53384 320 aa8.88□□□□□ -0.99
EFCAB11-204ENST00000553871 PLCB2Q00722 1185 aa8.85□□□□□ -0.99
EFCAB11-204ENST00000553871 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
EFCAB11-204ENST00000553871 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
EFCAB11-204ENST00000553871 CHADLQ6NUI6 762 aa8.82□□□□□ -1
EFCAB11-204ENST00000553871 RASEFQ8IZ41 740 aa8.8□□□□□ -1
EFCAB11-204ENST00000553871 CHGAP10645 457 aaKnown RBP8.79□□□□□ -1
EFCAB11-204ENST00000553871 BBXQ8WY36 941 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms