Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC090164.3-201ENST00000610780 2143 ntBASIC16.95■□□□□ 0.3
TO15178 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.95■□□□□ 0.3
TO15178 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.95■□□□□ 0.3
TO15178 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TO15178 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TO15178 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.95■□□□□ 0.3
TO15178 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.95■□□□□ 0.3
TO15178 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.95■□□□□ 0.3
TO15178 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.95■□□□□ 0.3
TO15178 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TO15178 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TO15178 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TO15178 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.94■□□□□ 0.3
TO15178 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TO15178 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TO15178 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TO15178 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.94■□□□□ 0.3
TO15178 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TO15178 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.94■□□□□ 0.3
TO15178 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 AL049597.2-201ENST00000565575 961 ntBASIC16.94■□□□□ 0.3
TO15178 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TO15178 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.94■□□□□ 0.3
TO15178 HYMAI.1-201ENST00000620949 238 ntBASIC16.94■□□□□ 0.3
TO15178 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.94■□□□□ 0.3
TO15178 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.94■□□□□ 0.3
TO15178 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.94■□□□□ 0.3
TO15178 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TO15178 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.94■□□□□ 0.3
TO15178 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TO15178 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
TO15178 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TO15178 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TO15178 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.93■□□□□ 0.3
TO15178 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.93■□□□□ 0.3
TO15178 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
TO15178 HLA-F-220ENST00000434407 884 ntBASIC16.93■□□□□ 0.3
TO15178 AL359075.1-203ENST00000462729 1002 ntBASIC16.93■□□□□ 0.3
TO15178 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.93■□□□□ 0.3
TO15178 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.93■□□□□ 0.3
TO15178 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.93■□□□□ 0.3
TO15178 AC079602.3-201ENST00000623931 403 ntBASIC16.93■□□□□ 0.3
TO15178 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.93■□□□□ 0.3
TO15178 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
TO15178 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TO15178 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TO15178 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TO15178 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
TO15178 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
TO15178 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TO15178 AL391807.1-203ENST00000604392 2365 ntBASIC16.92■□□□□ 0.3
TO15178 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.92■□□□□ 0.3
TO15178 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms