RNA–Protein interactions for RNA: ENST00000304672.5

PTCRA-201, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCRA, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-201ENST00000304672 NISCHQ9Y2I1 1504 aa47.62■■■■■ 5.21
PTCRA-201ENST00000304672 ABCC9O60706 1549 aa43.19■■■■■ 4.5
PTCRA-201ENST00000304672 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
PTCRA-201ENST00000304672 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
PTCRA-201ENST00000304672 DNAJC5BQ9UF47 199 aa40.81■■■■■ 4.12
PTCRA-201ENST00000304672 NACADO15069 1562 aa40.58■■■■■ 4.09
PTCRA-201ENST00000304672 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
PTCRA-201ENST00000304672 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
PTCRA-201ENST00000304672 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
PTCRA-201ENST00000304672 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
PTCRA-201ENST00000304672 BICRAQ9NZM4 1560 aa39.83■■■■□ 3.97
PTCRA-201ENST00000304672 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
PTCRA-201ENST00000304672 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
PTCRA-201ENST00000304672 SHROOM4Q9ULL8 1493 aa39.18■■■■□ 3.86
PTCRA-201ENST00000304672 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
PTCRA-201ENST00000304672 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
PTCRA-201ENST00000304672 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
PTCRA-201ENST00000304672 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
PTCRA-201ENST00000304672 DNAJC5Q9H3Z4 198 aa37.65■■■■□ 3.62
PTCRA-201ENST00000304672 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
PTCRA-201ENST00000304672 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
PTCRA-201ENST00000304672 CUX2O14529 1486 aa37.33■■■■□ 3.57
PTCRA-201ENST00000304672 ERCC6Q03468 1493 aa37.28■■■■□ 3.56
PTCRA-201ENST00000304672 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
PTCRA-201ENST00000304672 SMARCA2P51531 1590 aa37.19■■■■□ 3.54
PTCRA-201ENST00000304672 HMGXB3Q12766 1538 aa37.18■■■■□ 3.54
PTCRA-201ENST00000304672 NESP48681 1621 aa37.04■■■■□ 3.52
PTCRA-201ENST00000304672 BAZ1AQ9NRL2 1556 aaPredicted RBP36.98■■■■□ 3.51
PTCRA-201ENST00000304672 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
PTCRA-201ENST00000304672 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
PTCRA-201ENST00000304672 THOC2Q8NI27 1593 aaKnown RBP36.73■■■■□ 3.47
PTCRA-201ENST00000304672 MROH2BQ7Z745 1585 aa36.72■■■■□ 3.47
PTCRA-201ENST00000304672 LAMC3Q9Y6N6 1575 aa36.69■■■■□ 3.46
PTCRA-201ENST00000304672 KIF21AQ7Z4S6 1674 aa36.56■■■■□ 3.44
PTCRA-201ENST00000304672 PDS5BQ9NTI5 1447 aa36.46■■■■□ 3.43
PTCRA-201ENST00000304672 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
PTCRA-201ENST00000304672 WIZO95785 1651 aa36.28■■■■□ 3.4
PTCRA-201ENST00000304672 MRC2Q9UBG0 1479 aa36.2■■■■□ 3.39
PTCRA-201ENST00000304672 WDR62O43379 1518 aa36.13■■■■□ 3.37
PTCRA-201ENST00000304672 CEP164Q9UPV0 1460 aa35.99■■■■□ 3.35
PTCRA-201ENST00000304672 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
PTCRA-201ENST00000304672 TRIM41Q8WV44 630 aa35.88■■■■□ 3.33
PTCRA-201ENST00000304672 CFTRP13569 1480 aa35.85■■■■□ 3.33
PTCRA-201ENST00000304672 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
PTCRA-201ENST00000304672 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
PTCRA-201ENST00000304672 URB2Q14146 1524 aaKnown RBP35.67■■■■□ 3.3
PTCRA-201ENST00000304672 OSCARQ8IYS5 282 aa35.54■■■■□ 3.28
PTCRA-201ENST00000304672 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
PTCRA-201ENST00000304672 CCDC88BA6NC98 1476 aa35.36■■■■□ 3.25
PTCRA-201ENST00000304672 ZNF608Q9ULD9 1512 aaPredicted RBP35.29■■■■□ 3.24
PTCRA-201ENST00000304672 IFT140Q96RY7 1462 aa35.27■■■■□ 3.24
PTCRA-201ENST00000304672 TOPBP1Q92547 1522 aa35.22■■■■□ 3.23
PTCRA-201ENST00000304672 RIMBP3CA6NJZ7 1639 aa35.19■■■■□ 3.22
PTCRA-201ENST00000304672 RIMBP3BA6NNM3 1639 aa35.19■■■■□ 3.22
PTCRA-201ENST00000304672 RIMBP3Q9UFD9 1639 aa35.19■■■■□ 3.22
PTCRA-201ENST00000304672 EIF4G3O43432 1585 aaKnown RBP35.08■■■■□ 3.21
PTCRA-201ENST00000304672 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
PTCRA-201ENST00000304672 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
PTCRA-201ENST00000304672 ARHGEF11O15085 1522 aa35.02■■■■□ 3.2
PTCRA-201ENST00000304672 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
PTCRA-201ENST00000304672 AQRO60306 1485 aaKnown RBP eCLIP34.91■■■■□ 3.18
PTCRA-201ENST00000304672 CHD1O14646 1710 aa34.89■■■■□ 3.18
PTCRA-201ENST00000304672 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
PTCRA-201ENST00000304672 CYB5RLQ6IPT4 315 aa34.75■■■■□ 3.15
PTCRA-201ENST00000304672 RAD54L2Q9Y4B4 1467 aa34.73■■■■□ 3.15
PTCRA-201ENST00000304672 FBLN2P98095 1184 aa34.7■■■■□ 3.15
PTCRA-201ENST00000304672 ARAP1Q96P48 1450 aa34.67■■■■□ 3.14
PTCRA-201ENST00000304672 SOGA1O94964 1423 aa34.64■■■■□ 3.14
PTCRA-201ENST00000304672 TDRD9Q8NDG6 1382 aaKnown RBP34.64■■■■□ 3.14
PTCRA-201ENST00000304672 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
PTCRA-201ENST00000304672 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
PTCRA-201ENST00000304672 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
PTCRA-201ENST00000304672 CUX1P39880 1505 aa34.51■■■■□ 3.12
PTCRA-201ENST00000304672 CLASP1Q7Z460 1538 aa34.47■■■■□ 3.11
PTCRA-201ENST00000304672 TRHP20396 242 aaPredicted RBP34.46■■■■□ 3.11
PTCRA-201ENST00000304672 MAGI1Q96QZ7 1491 aaPredicted RBP34.42■■■■□ 3.1
PTCRA-201ENST00000304672 CHMP7Q8WUX9 453 aaPredicted RBP34.39■■■■□ 3.1
PTCRA-201ENST00000304672 SYNJ1O43426 1573 aa34.39■■■■□ 3.1
PTCRA-201ENST00000304672 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
PTCRA-201ENST00000304672 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
PTCRA-201ENST00000304672 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
PTCRA-201ENST00000304672 GAPVD1Q14C86 1478 aa34.23■■■■□ 3.07
PTCRA-201ENST00000304672 ABCA5Q8WWZ7 1642 aa34.16■■■■□ 3.06
PTCRA-201ENST00000304672 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
PTCRA-201ENST00000304672 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
PTCRA-201ENST00000304672 GRIN2AQ12879 1464 aa33.96■■■■□ 3.03
PTCRA-201ENST00000304672 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
PTCRA-201ENST00000304672 WRNQ14191 1432 aaPredicted RBP eCLIP33.94■■■■□ 3.02
PTCRA-201ENST00000304672 ADAMTS12P58397 1594 aa33.93■■■■□ 3.02
PTCRA-201ENST00000304672 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
PTCRA-201ENST00000304672 BIVM-ERCC5R4GMW8 1640 aa33.88■■■■□ 3.01
PTCRA-201ENST00000304672 NUP160Q12769 1436 aa33.87■■■■□ 3.01
PTCRA-201ENST00000304672 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
PTCRA-201ENST00000304672 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
PTCRA-201ENST00000304672 SHROOM2Q13796 1616 aa33.77■■■■□ 3
PTCRA-201ENST00000304672 ERICH3Q5RHP9 1530 aa33.72■■■□□ 2.99
PTCRA-201ENST00000304672 AEBP2Q6ZN18 517 aaPredicted RBP33.65■■■□□ 2.98
PTCRA-201ENST00000304672 PRG4Q92954 1404 aaPredicted RBP33.55■■■□□ 2.96
PTCRA-201ENST00000304672 KIF13AQ9H1H9 1805 aa33.5■■■□□ 2.95
PTCRA-201ENST00000304672 JPH4Q96JJ6 628 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms