Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTBDNQ9BSG5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RTBDNQ9BSG5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 AP004609.3-201ENST00000610705 1884 ntBASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTBDNQ9BSG5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTBDNQ9BSG5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.65■□□□□ 0.9
RTBDNQ9BSG5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RTBDNQ9BSG5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTBDNQ9BSG5 WHAMMP2-203ENST00000563942 1603 ntBASIC20.64■□□□□ 0.9
RTBDNQ9BSG5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTBDNQ9BSG5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTBDNQ9BSG5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTBDNQ9BSG5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.64■□□□□ 0.89
RTBDNQ9BSG5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 CAHM-201ENST00000604200 896 ntBASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.63■□□□□ 0.89
RTBDNQ9BSG5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
RTBDNQ9BSG5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTBDNQ9BSG5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTBDNQ9BSG5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTBDNQ9BSG5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.6■□□□□ 0.89
RTBDNQ9BSG5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RTBDNQ9BSG5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.6■□□□□ 0.89
RTBDNQ9BSG5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTBDNQ9BSG5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTBDNQ9BSG5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
RTBDNQ9BSG5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.58■□□□□ 0.88
RTBDNQ9BSG5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTBDNQ9BSG5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTBDNQ9BSG5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.57■□□□□ 0.88
RTBDNQ9BSG5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTBDNQ9BSG5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RTBDNQ9BSG5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTBDNQ9BSG5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTBDNQ9BSG5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTBDNQ9BSG5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTBDNQ9BSG5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RTBDNQ9BSG5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTBDNQ9BSG5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTBDNQ9BSG5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTBDNQ9BSG5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTBDNQ9BSG5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTBDNQ9BSG5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTBDNQ9BSG5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTBDNQ9BSG5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RTBDNQ9BSG5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.53■□□□□ 0.88
RTBDNQ9BSG5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTBDNQ9BSG5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.52■□□□□ 0.88
RTBDNQ9BSG5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.52■□□□□ 0.88
RTBDNQ9BSG5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTBDNQ9BSG5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTBDNQ9BSG5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTBDNQ9BSG5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTBDNQ9BSG5 ERN1-208ENST00000606895 2068 ntBASIC20.52■□□□□ 0.87
RTBDNQ9BSG5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTBDNQ9BSG5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTBDNQ9BSG5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTBDNQ9BSG5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTBDNQ9BSG5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.51■□□□□ 0.87
RTBDNQ9BSG5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTBDNQ9BSG5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.51■□□□□ 0.87
RTBDNQ9BSG5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTBDNQ9BSG5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.5■□□□□ 0.87
RTBDNQ9BSG5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTBDNQ9BSG5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 AC142472.1-201ENST00000612013 1741 ntBASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTBDNQ9BSG5 LINC00273-201ENST00000539813 1452 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms