Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SUDS3P1-201ENST00000505831 966 ntBASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 AC074183.2-201ENST00000623112 922 ntBASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 UNC93B8-201ENST00000511903 705 ntBASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 AC120057.4-201ENST00000624722 1615 ntBASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SYNE2Q8WXH0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 AC097381.1-201ENST00000429019 1296 ntBASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 PVT1_1.1-201ENST00000615125 194 ntBASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.6□□□□□ -0.71
SYNE2Q8WXH0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC10.59□□□□□ -0.71
SYNE2Q8WXH0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SYNE2Q8WXH0 AC009831.1-201ENST00000580420 1582 ntBASIC10.59□□□□□ -0.71
SYNE2Q8WXH0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 MIR4508-201ENST00000584178 70 ntBASIC10.58□□□□□ -0.72
SYNE2Q8WXH0 AC126177.7-201ENST00000547904 679 ntBASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SYNE2Q8WXH0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 SRR-208ENST00000576848 588 ntTSL 4 BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 LONRF2P2-201ENST00000439212 571 ntBASIC10.56□□□□□ -0.72
SYNE2Q8WXH0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 AC142381.2-201ENST00000566120 298 ntBASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 AC087623.3-201ENST00000607047 1098 ntBASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 AL157400.5-201ENST00000507624 621 ntBASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYNE2Q8WXH0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 AL031432.3-201ENST00000607698 485 ntBASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC10.54□□□□□ -0.72
SYNE2Q8WXH0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 LINC00273-201ENST00000539813 1452 ntBASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SYNE2Q8WXH0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 ABHD17AP1-201ENST00000358206 933 ntBASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC10.52□□□□□ -0.72
SYNE2Q8WXH0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 MED25-210ENST00000612854 801 ntTSL 5 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 MED25-214ENST00000622402 642 ntTSL 5 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms