Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.38■■□□□ 1.17
BBS1Q8NFJ9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BBS1Q8NFJ9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BBS1Q8NFJ9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
BBS1Q8NFJ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BBS1Q8NFJ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BBS1Q8NFJ9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BBS1Q8NFJ9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BBS1Q8NFJ9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.35■■□□□ 1.17
BBS1Q8NFJ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.35■■□□□ 1.17
BBS1Q8NFJ9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BBS1Q8NFJ9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BBS1Q8NFJ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
BBS1Q8NFJ9 AC020928.2-201ENST00000588717 2197 ntBASIC22.34■■□□□ 1.17
BBS1Q8NFJ9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.34■■□□□ 1.17
BBS1Q8NFJ9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BBS1Q8NFJ9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BBS1Q8NFJ9 AP004609.3-201ENST00000610705 1884 ntBASIC22.32■■□□□ 1.16
BBS1Q8NFJ9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BBS1Q8NFJ9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.31■■□□□ 1.16
BBS1Q8NFJ9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.31■■□□□ 1.16
BBS1Q8NFJ9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.3■■□□□ 1.16
BBS1Q8NFJ9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BBS1Q8NFJ9 AC092803.2-201ENST00000564287 1899 ntBASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BBS1Q8NFJ9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS1Q8NFJ9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS1Q8NFJ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.27■■□□□ 1.16
BBS1Q8NFJ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
BBS1Q8NFJ9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BBS1Q8NFJ9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.26■■□□□ 1.15
BBS1Q8NFJ9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS1Q8NFJ9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS1Q8NFJ9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BBS1Q8NFJ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.26■■□□□ 1.15
BBS1Q8NFJ9 DUSP8P4-201ENST00000399538 1761 ntBASIC22.25■■□□□ 1.15
BBS1Q8NFJ9 MIR3665-201ENST00000578708 105 ntBASIC22.25■■□□□ 1.15
BBS1Q8NFJ9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.25■■□□□ 1.15
BBS1Q8NFJ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.25■■□□□ 1.15
BBS1Q8NFJ9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
BBS1Q8NFJ9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.23■■□□□ 1.15
BBS1Q8NFJ9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.23■■□□□ 1.15
BBS1Q8NFJ9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.23■■□□□ 1.15
BBS1Q8NFJ9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BBS1Q8NFJ9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.22■■□□□ 1.15
BBS1Q8NFJ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
BBS1Q8NFJ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
BBS1Q8NFJ9 AC110285.7-201ENST00000624417 1536 ntBASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BBS1Q8NFJ9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BBS1Q8NFJ9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
BBS1Q8NFJ9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
BBS1Q8NFJ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
BBS1Q8NFJ9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.18■■□□□ 1.14
BBS1Q8NFJ9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BBS1Q8NFJ9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BBS1Q8NFJ9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BBS1Q8NFJ9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BBS1Q8NFJ9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.17■■□□□ 1.14
BBS1Q8NFJ9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
BBS1Q8NFJ9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms