Protein–RNA interactions for Protein: Q8IYA6

CKAP2L, Cytoskeleton-associated protein 2-like, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2LQ8IYA6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CKAP2LQ8IYA6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CKAP2LQ8IYA6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.81■■■□□ 2.2
CKAP2LQ8IYA6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.8■■■□□ 2.2
CKAP2LQ8IYA6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.8■■■□□ 2.2
CKAP2LQ8IYA6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CKAP2LQ8IYA6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CKAP2LQ8IYA6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CKAP2LQ8IYA6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.79■■■□□ 2.2
CKAP2LQ8IYA6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CKAP2LQ8IYA6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
CKAP2LQ8IYA6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.78■■■□□ 2.2
CKAP2LQ8IYA6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
CKAP2LQ8IYA6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CKAP2LQ8IYA6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
CKAP2LQ8IYA6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.76■■■□□ 2.19
CKAP2LQ8IYA6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CKAP2LQ8IYA6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
CKAP2LQ8IYA6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 AC135731.1-201ENST00000569415 2548 ntBASIC28.75■■■□□ 2.19
CKAP2LQ8IYA6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CKAP2LQ8IYA6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CKAP2LQ8IYA6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.74■■■□□ 2.19
CKAP2LQ8IYA6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CKAP2LQ8IYA6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CKAP2LQ8IYA6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CKAP2LQ8IYA6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CKAP2LQ8IYA6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CKAP2LQ8IYA6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.72■■■□□ 2.19
CKAP2LQ8IYA6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CKAP2LQ8IYA6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CKAP2LQ8IYA6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.71■■■□□ 2.19
CKAP2LQ8IYA6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.71■■■□□ 2.19
CKAP2LQ8IYA6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
CKAP2LQ8IYA6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
CKAP2LQ8IYA6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.7■■■□□ 2.19
CKAP2LQ8IYA6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.69■■■□□ 2.18
CKAP2LQ8IYA6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
CKAP2LQ8IYA6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CKAP2LQ8IYA6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CKAP2LQ8IYA6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CKAP2LQ8IYA6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.68■■■□□ 2.18
CKAP2LQ8IYA6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.68■■■□□ 2.18
CKAP2LQ8IYA6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.68■■■□□ 2.18
CKAP2LQ8IYA6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CKAP2LQ8IYA6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CKAP2LQ8IYA6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CKAP2LQ8IYA6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CKAP2LQ8IYA6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CKAP2LQ8IYA6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CKAP2LQ8IYA6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.66■■■□□ 2.18
CKAP2LQ8IYA6 AL449106.1-201ENST00000608517 1980 ntBASIC28.66■■■□□ 2.18
CKAP2LQ8IYA6 AP002414.2-202ENST00000590929 1450 ntBASIC28.66■■■□□ 2.18
CKAP2LQ8IYA6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.65■■■□□ 2.18
CKAP2LQ8IYA6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.65■■■□□ 2.18
CKAP2LQ8IYA6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
CKAP2LQ8IYA6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CKAP2LQ8IYA6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CKAP2LQ8IYA6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CKAP2LQ8IYA6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CKAP2LQ8IYA6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.64■■■□□ 2.18
CKAP2LQ8IYA6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.63■■■□□ 2.17
CKAP2LQ8IYA6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.63■■■□□ 2.17
CKAP2LQ8IYA6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.62■■■□□ 2.17
CKAP2LQ8IYA6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.62■■■□□ 2.17
CKAP2LQ8IYA6 AC110285.7-201ENST00000624417 1536 ntBASIC28.62■■■□□ 2.17
CKAP2LQ8IYA6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CKAP2LQ8IYA6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CKAP2LQ8IYA6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CKAP2LQ8IYA6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CKAP2LQ8IYA6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CKAP2LQ8IYA6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.59■■■□□ 2.17
CKAP2LQ8IYA6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CKAP2LQ8IYA6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CKAP2LQ8IYA6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CKAP2LQ8IYA6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
CKAP2LQ8IYA6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CKAP2LQ8IYA6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CKAP2LQ8IYA6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms