Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC36.51■■■■□ 3.43
UBR1Q8IWV7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC36.5■■■■□ 3.43
UBR1Q8IWV7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC36.5■■■■□ 3.43
UBR1Q8IWV7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
UBR1Q8IWV7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
UBR1Q8IWV7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
UBR1Q8IWV7 AC010980.1-201ENST00000587192 1142 ntBASIC36.48■■■■□ 3.43
UBR1Q8IWV7 KRT8P33-201ENST00000508125 1423 ntBASIC36.48■■■■□ 3.43
UBR1Q8IWV7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC36.48■■■■□ 3.43
UBR1Q8IWV7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
UBR1Q8IWV7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC36.48■■■■□ 3.43
UBR1Q8IWV7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
UBR1Q8IWV7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC36.47■■■■□ 3.43
UBR1Q8IWV7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
UBR1Q8IWV7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
UBR1Q8IWV7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
UBR1Q8IWV7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC36.46■■■■□ 3.43
UBR1Q8IWV7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC36.45■■■■□ 3.43
UBR1Q8IWV7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
UBR1Q8IWV7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
UBR1Q8IWV7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC36.45■■■■□ 3.42
UBR1Q8IWV7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
UBR1Q8IWV7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC36.44■■■■□ 3.42
UBR1Q8IWV7 GUSBP5-201ENST00000418136 578 ntBASIC36.44■■■■□ 3.42
UBR1Q8IWV7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC36.44■■■■□ 3.42
UBR1Q8IWV7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
UBR1Q8IWV7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC36.43■■■■□ 3.42
UBR1Q8IWV7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC36.43■■■■□ 3.42
UBR1Q8IWV7 AC131212.1-201ENST00000613771 668 ntBASIC36.43■■■■□ 3.42
UBR1Q8IWV7 PVT1_1.1-201ENST00000615125 194 ntBASIC36.43■■■■□ 3.42
UBR1Q8IWV7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
UBR1Q8IWV7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
UBR1Q8IWV7 RP9P-202ENST00000450133 1212 ntBASIC36.42■■■■□ 3.42
UBR1Q8IWV7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
UBR1Q8IWV7 HES6-204ENST00000409182 863 ntTSL 2 BASIC36.4■■■■□ 3.42
UBR1Q8IWV7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC36.4■■■■□ 3.42
UBR1Q8IWV7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
UBR1Q8IWV7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC36.39■■■■□ 3.42
UBR1Q8IWV7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC36.38■■■■□ 3.41
UBR1Q8IWV7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
UBR1Q8IWV7 AC103834.1-201ENST00000520383 144 ntBASIC36.38■■■■□ 3.41
UBR1Q8IWV7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
UBR1Q8IWV7 MIR4508-201ENST00000584178 70 ntBASIC36.37■■■■□ 3.41
UBR1Q8IWV7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
UBR1Q8IWV7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC36.37■■■■□ 3.41
UBR1Q8IWV7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
UBR1Q8IWV7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
UBR1Q8IWV7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
UBR1Q8IWV7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC36.36■■■■□ 3.41
UBR1Q8IWV7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC36.35■■■■□ 3.41
UBR1Q8IWV7 AL359258.2-201ENST00000564063 1566 ntBASIC36.35■■■■□ 3.41
UBR1Q8IWV7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC36.35■■■■□ 3.41
UBR1Q8IWV7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC36.34■■■■□ 3.41
UBR1Q8IWV7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC36.33■■■■□ 3.41
UBR1Q8IWV7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC36.33■■■■□ 3.41
UBR1Q8IWV7 AC074183.2-201ENST00000623112 922 ntBASIC36.33■■■■□ 3.41
UBR1Q8IWV7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
UBR1Q8IWV7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
UBR1Q8IWV7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
UBR1Q8IWV7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
UBR1Q8IWV7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC36.32■■■■□ 3.4
UBR1Q8IWV7 MIR6765-201ENST00000614092 87 ntBASIC36.32■■■■□ 3.4
UBR1Q8IWV7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
UBR1Q8IWV7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC36.31■■■■□ 3.4
UBR1Q8IWV7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC36.3■■■■□ 3.4
UBR1Q8IWV7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC36.29■■■■□ 3.4
UBR1Q8IWV7 OR2A1-AS1-204ENST00000470435 602 ntBASIC36.29■■■■□ 3.4
UBR1Q8IWV7 AC139795.1-202ENST00000500444 432 ntBASIC36.29■■■■□ 3.4
UBR1Q8IWV7 THA1P-201ENST00000590384 1145 ntBASIC36.29■■■■□ 3.4
UBR1Q8IWV7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
UBR1Q8IWV7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC36.28■■■■□ 3.4
UBR1Q8IWV7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC36.27■■■■□ 3.4
UBR1Q8IWV7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC36.27■■■■□ 3.4
UBR1Q8IWV7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC36.27■■■■□ 3.4
UBR1Q8IWV7 AC103724.3-201ENST00000564481 992 ntBASIC36.27■■■■□ 3.4
UBR1Q8IWV7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC36.26■■■■□ 3.4
UBR1Q8IWV7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
UBR1Q8IWV7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC36.25■■■■□ 3.39
UBR1Q8IWV7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC36.25■■■■□ 3.39
UBR1Q8IWV7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC36.25■■■■□ 3.39
UBR1Q8IWV7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC36.25■■■■□ 3.39
UBR1Q8IWV7 BHLHE23-202ENST00000612929 1109 ntBASIC36.24■■■■□ 3.39
UBR1Q8IWV7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
UBR1Q8IWV7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC36.23■■■■□ 3.39
UBR1Q8IWV7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms