Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.16■■■□□ 2.74
COL23A1Q86Y22 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL23A1Q86Y22 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.15■■■□□ 2.74
COL23A1Q86Y22 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
COL23A1Q86Y22 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL23A1Q86Y22 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
COL23A1Q86Y22 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
COL23A1Q86Y22 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.14■■■□□ 2.74
COL23A1Q86Y22 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.14■■■□□ 2.74
COL23A1Q86Y22 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
COL23A1Q86Y22 RAP2CP1-202ENST00000605179 643 ntBASIC32.13■■■□□ 2.73
COL23A1Q86Y22 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
COL23A1Q86Y22 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL23A1Q86Y22 YBX1P4-201ENST00000392794 808 ntBASIC32.12■■■□□ 2.73
COL23A1Q86Y22 AL359258.2-201ENST00000564063 1566 ntBASIC32.11■■■□□ 2.73
COL23A1Q86Y22 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
COL23A1Q86Y22 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
COL23A1Q86Y22 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
COL23A1Q86Y22 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.11■■■□□ 2.73
COL23A1Q86Y22 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 AC093536.1-201ENST00000569153 554 ntBASIC32.1■■■□□ 2.73
COL23A1Q86Y22 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.1■■■□□ 2.73
COL23A1Q86Y22 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.09■■■□□ 2.73
COL23A1Q86Y22 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
COL23A1Q86Y22 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL23A1Q86Y22 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL23A1Q86Y22 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
COL23A1Q86Y22 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
COL23A1Q86Y22 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.08■■■□□ 2.73
COL23A1Q86Y22 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.08■■■□□ 2.73
COL23A1Q86Y22 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.08■■■□□ 2.73
COL23A1Q86Y22 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
COL23A1Q86Y22 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
COL23A1Q86Y22 AC139795.1-202ENST00000500444 432 ntBASIC32.07■■■□□ 2.72
COL23A1Q86Y22 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.07■■■□□ 2.72
COL23A1Q86Y22 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
COL23A1Q86Y22 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.06■■■□□ 2.72
COL23A1Q86Y22 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
COL23A1Q86Y22 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
COL23A1Q86Y22 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
COL23A1Q86Y22 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
COL23A1Q86Y22 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
COL23A1Q86Y22 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.05■■■□□ 2.72
COL23A1Q86Y22 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.04■■■□□ 2.72
COL23A1Q86Y22 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
COL23A1Q86Y22 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.04■■■□□ 2.72
COL23A1Q86Y22 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.04■■■□□ 2.72
COL23A1Q86Y22 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.04■■■□□ 2.72
COL23A1Q86Y22 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.03■■■□□ 2.72
COL23A1Q86Y22 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.03■■■□□ 2.72
COL23A1Q86Y22 MIR935-201ENST00000401179 91 ntBASIC32.03■■■□□ 2.72
COL23A1Q86Y22 MIR6765-201ENST00000614092 87 ntBASIC32.03■■■□□ 2.72
COL23A1Q86Y22 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
COL23A1Q86Y22 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC32.02■■■□□ 2.72
COL23A1Q86Y22 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.02■■■□□ 2.72
COL23A1Q86Y22 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.02■■■□□ 2.72
COL23A1Q86Y22 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
COL23A1Q86Y22 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
COL23A1Q86Y22 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL23A1Q86Y22 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL23A1Q86Y22 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
COL23A1Q86Y22 AL356441.2-201ENST00000443009 864 ntBASIC31.99■■■□□ 2.71
COL23A1Q86Y22 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.99■■■□□ 2.71
COL23A1Q86Y22 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
COL23A1Q86Y22 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
COL23A1Q86Y22 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COL23A1Q86Y22 MIR4508-201ENST00000584178 70 ntBASIC31.98■■■□□ 2.71
COL23A1Q86Y22 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.98■■■□□ 2.71
COL23A1Q86Y22 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.97■■■□□ 2.71
COL23A1Q86Y22 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.96■■■□□ 2.71
COL23A1Q86Y22 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
COL23A1Q86Y22 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.95■■■□□ 2.71
COL23A1Q86Y22 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.95■■■□□ 2.71
COL23A1Q86Y22 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.95■■■□□ 2.71
COL23A1Q86Y22 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
COL23A1Q86Y22 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
COL23A1Q86Y22 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.94■■■□□ 2.7
COL23A1Q86Y22 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.94■■■□□ 2.7
COL23A1Q86Y22 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL23A1Q86Y22 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.93■■■□□ 2.7
COL23A1Q86Y22 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL23A1Q86Y22 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
COL23A1Q86Y22 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL23A1Q86Y22 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.92■■■□□ 2.7
COL23A1Q86Y22 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL23A1Q86Y22 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.91■■■□□ 2.7
COL23A1Q86Y22 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL23A1Q86Y22 AC103724.3-201ENST00000564481 992 ntBASIC31.91■■■□□ 2.7
COL23A1Q86Y22 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms