Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC35.43■■■■□ 3.26
MSH6P52701 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
MSH6P52701 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
MSH6P52701 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC35.41■■■■□ 3.26
MSH6P52701 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
MSH6P52701 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
MSH6P52701 AC025884.2-201ENST00000553429 711 ntBASIC35.4■■■■□ 3.26
MSH6P52701 AL356441.2-201ENST00000443009 864 ntBASIC35.39■■■■□ 3.26
MSH6P52701 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.39■■■■□ 3.26
MSH6P52701 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
MSH6P52701 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
MSH6P52701 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
MSH6P52701 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
MSH6P52701 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC35.39■■■■□ 3.26
MSH6P52701 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.26
MSH6P52701 RAP2CP1-202ENST00000605179 643 ntBASIC35.38■■■■□ 3.26
MSH6P52701 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
MSH6P52701 PVT1_1.1-201ENST00000615125 194 ntBASIC35.38■■■■□ 3.25
MSH6P52701 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
MSH6P52701 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC35.37■■■■□ 3.25
MSH6P52701 AC093536.1-201ENST00000569153 554 ntBASIC35.37■■■■□ 3.25
MSH6P52701 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
MSH6P52701 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
MSH6P52701 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
MSH6P52701 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
MSH6P52701 MIR6765-201ENST00000614092 87 ntBASIC35.35■■■■□ 3.25
MSH6P52701 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC35.34■■■■□ 3.25
MSH6P52701 MIR4508-201ENST00000584178 70 ntBASIC35.34■■■■□ 3.25
MSH6P52701 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
MSH6P52701 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
MSH6P52701 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
MSH6P52701 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
MSH6P52701 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
MSH6P52701 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC35.31■■■■□ 3.24
MSH6P52701 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
MSH6P52701 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
MSH6P52701 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.31■■■■□ 3.24
MSH6P52701 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
MSH6P52701 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.31■■■■□ 3.24
MSH6P52701 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
MSH6P52701 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
MSH6P52701 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC35.3■■■■□ 3.24
MSH6P52701 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC35.3■■■■□ 3.24
MSH6P52701 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
MSH6P52701 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC35.3■■■■□ 3.24
MSH6P52701 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
MSH6P52701 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
MSH6P52701 AL359258.2-201ENST00000564063 1566 ntBASIC35.29■■■■□ 3.24
MSH6P52701 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
MSH6P52701 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.28■■■■□ 3.24
MSH6P52701 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
MSH6P52701 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
MSH6P52701 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC35.28■■■■□ 3.24
MSH6P52701 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
MSH6P52701 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
MSH6P52701 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
MSH6P52701 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.27■■■■□ 3.24
MSH6P52701 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.27■■■■□ 3.24
MSH6P52701 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC35.27■■■■□ 3.24
MSH6P52701 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC35.27■■■■□ 3.24
MSH6P52701 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC35.27■■■■□ 3.24
MSH6P52701 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
MSH6P52701 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
MSH6P52701 PRTG-204ENST00000561292 833 ntTSL 3 BASIC35.26■■■■□ 3.24
MSH6P52701 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.26■■■■□ 3.24
MSH6P52701 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.23
MSH6P52701 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
MSH6P52701 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC35.25■■■■□ 3.23
MSH6P52701 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
MSH6P52701 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC35.25■■■■□ 3.23
MSH6P52701 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.24■■■■□ 3.23
MSH6P52701 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC35.24■■■■□ 3.23
MSH6P52701 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.24■■■■□ 3.23
MSH6P52701 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.24■■■■□ 3.23
MSH6P52701 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
MSH6P52701 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
MSH6P52701 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC35.23■■■■□ 3.23
MSH6P52701 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC35.22■■■■□ 3.23
MSH6P52701 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.22■■■■□ 3.23
MSH6P52701 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
MSH6P52701 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC35.21■■■■□ 3.23
MSH6P52701 AC103724.3-201ENST00000564481 992 ntBASIC35.21■■■■□ 3.23
MSH6P52701 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.21■■■■□ 3.23
MSH6P52701 AL031848.2-201ENST00000607670 837 ntBASIC35.21■■■■□ 3.23
MSH6P52701 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
MSH6P52701 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
MSH6P52701 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
MSH6P52701 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC35.2■■■■□ 3.23
MSH6P52701 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
MSH6P52701 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC35.2■■■■□ 3.23
MSH6P52701 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
MSH6P52701 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC35.2■■■■□ 3.22
MSH6P52701 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC35.19■■■■□ 3.22
MSH6P52701 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
MSH6P52701 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
MSH6P52701 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC35.18■■■■□ 3.22
MSH6P52701 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC35.17■■■■□ 3.22
MSH6P52701 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC35.17■■■■□ 3.22
MSH6P52701 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
MSH6P52701 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms