Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM253P0C7T8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
TMEM253P0C7T8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM253P0C7T8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.41■■□□□ 1.82
TMEM253P0C7T8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM253P0C7T8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM253P0C7T8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.4■■□□□ 1.82
TMEM253P0C7T8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.4■■□□□ 1.82
TMEM253P0C7T8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM253P0C7T8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM253P0C7T8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
TMEM253P0C7T8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.38■■□□□ 1.81
TMEM253P0C7T8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM253P0C7T8 DUX4L29-201ENST00000425409 679 ntBASIC26.38■■□□□ 1.81
TMEM253P0C7T8 AP004609.3-201ENST00000610705 1884 ntBASIC26.38■■□□□ 1.81
TMEM253P0C7T8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM253P0C7T8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.37■■□□□ 1.81
TMEM253P0C7T8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.37■■□□□ 1.81
TMEM253P0C7T8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM253P0C7T8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM253P0C7T8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TMEM253P0C7T8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM253P0C7T8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.36■■□□□ 1.81
TMEM253P0C7T8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM253P0C7T8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM253P0C7T8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.35■■□□□ 1.81
TMEM253P0C7T8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.35■■□□□ 1.81
TMEM253P0C7T8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
TMEM253P0C7T8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TMEM253P0C7T8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM253P0C7T8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM253P0C7T8 AC145676.1-201ENST00000514988 2004 ntBASIC26.34■■□□□ 1.81
TMEM253P0C7T8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM253P0C7T8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM253P0C7T8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
TMEM253P0C7T8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM253P0C7T8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.32■■□□□ 1.8
TMEM253P0C7T8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.32■■□□□ 1.8
TMEM253P0C7T8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM253P0C7T8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM253P0C7T8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.31■■□□□ 1.8
TMEM253P0C7T8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.31■■□□□ 1.8
TMEM253P0C7T8 WHAMMP3-201ENST00000611636 1609 ntBASIC26.3■■□□□ 1.8
TMEM253P0C7T8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM253P0C7T8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEM253P0C7T8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM253P0C7T8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.29■■□□□ 1.8
TMEM253P0C7T8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEM253P0C7T8 AC142472.1-201ENST00000612013 1741 ntBASIC26.28■■□□□ 1.8
TMEM253P0C7T8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM253P0C7T8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM253P0C7T8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMEM253P0C7T8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TMEM253P0C7T8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMEM253P0C7T8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM253P0C7T8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.26■■□□□ 1.79
TMEM253P0C7T8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM253P0C7T8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.26■■□□□ 1.79
TMEM253P0C7T8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM253P0C7T8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM253P0C7T8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.25■■□□□ 1.79
TMEM253P0C7T8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM253P0C7T8 AC092803.2-201ENST00000564287 1899 ntBASIC26.24■■□□□ 1.79
TMEM253P0C7T8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM253P0C7T8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.23■■□□□ 1.79
TMEM253P0C7T8 DUSP8P4-201ENST00000399538 1761 ntBASIC26.23■■□□□ 1.79
TMEM253P0C7T8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEM253P0C7T8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TMEM253P0C7T8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.22■■□□□ 1.79
TMEM253P0C7T8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM253P0C7T8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.21■■□□□ 1.79
TMEM253P0C7T8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TMEM253P0C7T8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM253P0C7T8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
TMEM253P0C7T8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TMEM253P0C7T8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.2■■□□□ 1.78
TMEM253P0C7T8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.2■■□□□ 1.78
TMEM253P0C7T8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TMEM253P0C7T8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TMEM253P0C7T8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM253P0C7T8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM253P0C7T8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM253P0C7T8 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.18■■□□□ 1.78
TMEM253P0C7T8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM253P0C7T8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMEM253P0C7T8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMEM253P0C7T8 LINC01971-201ENST00000617888 1048 ntBASIC26.16■■□□□ 1.78
TMEM253P0C7T8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
TMEM253P0C7T8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.16■■□□□ 1.78
TMEM253P0C7T8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM253P0C7T8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM253P0C7T8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM253P0C7T8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.15■■□□□ 1.78
TMEM253P0C7T8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms