Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 ZNF566-210ENST00000494354 925 ntTSL 420.64■□□□□ 0.892e-8■■■■■ 61.2
DKC1O60832 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.442e-8■■■■■ 61.2
DKC1O60832 ZNF566-209ENST00000493391 3425 ntTSL 1 (best) BASIC12.03□□□□□ -0.482e-8■■■■■ 61.2
DKC1O60832 ZNF566-203ENST00000427002 584 ntTSL 29.89□□□□□ -0.832e-8■■■■■ 61.2
DKC1O60832 ZNF566-208ENST00000480361 474 ntTSL 48.25□□□□□ -1.092e-8■■■■■ 61.2
DKC1O60832 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.092e-8■■■■■ 61.2
DKC1O60832 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.242e-8■■■■■ 61.2
DKC1O60832 ZNF566-205ENST00000452939 793 ntTSL 27.29□□□□□ -1.242e-8■■■■■ 61.2
DKC1O60832 ZNF566-206ENST00000460937 570 ntTSL 44.1□□□□□ -1.752e-8■■■■■ 61.2
DKC1O60832 SNORA32-201ENST00000384072 121 ntBASIC-0.08□□□□□ -2.421e-323■■■■■ 61
DKC1O60832 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.56□□□□□ -0.44e-10■■■■■ 60.7
DKC1O60832 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.474e-10■■■■■ 60.7
DKC1O60832 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.46□□□□□ -0.94e-10■■■■■ 60.7
DKC1O60832 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.934e-10■■■■■ 60.7
DKC1O60832 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.94□□□□□ -0.984e-10■■■■■ 60.7
DKC1O60832 PUM1-214ENST00000525843 4528 ntTSL 58.18□□□□□ -1.14e-10■■■■■ 60.7
DKC1O60832 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.224e-10■■■■■ 60.7
DKC1O60832 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.83□□□□□ -1.324e-10■■■■■ 60.7
DKC1O60832 DANCR-203ENST00000441504 336 ntTSL 219.82■□□□□ 0.761e-323■■■■■ 60.7
DKC1O60832 PNPLA7-203ENST00000434090 2419 ntTSL 515.21■□□□□ 0.033e-11■■■■■ 60.6
DKC1O60832 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.193e-11■■■■■ 60.6
DKC1O60832 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.213e-11■■■■■ 60.6
DKC1O60832 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.091e-16■■■■■ 60.6
DKC1O60832 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.171e-16■■■■■ 60.6
DKC1O60832 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.261e-16■■■■■ 60.6
DKC1O60832 MKL2-210ENST00000574998 545 ntTSL 46.03□□□□□ -1.441e-16■■■■■ 60.6
DKC1O60832 MKL2-212ENST00000575768 389 ntTSL 33.51□□□□□ -1.851e-16■■■■■ 60.6
DKC1O60832 CHD8-206ENST00000553870 679 ntTSL 510.53□□□□□ -0.729e-32■■■■■ 60.5
DKC1O60832 SNORD9-201ENST00000362566 104 ntBASIC4.03□□□□□ -1.769e-32■■■■■ 60.5
DKC1O60832 EIF4A2-209ENST00000461021 575 ntTSL 24.94□□□□□ -1.621e-323■■■■■ 60.4
DKC1O60832 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.812e-6■■■■■ 60.4
DKC1O60832 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)19.35■□□□□ 0.692e-6■■■■■ 60.4
DKC1O60832 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■■■■ 60.4
DKC1O60832 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 522.54■■□□□ 1.21e-7■■■■■ 60.3
DKC1O60832 NUCB1-207ENST00000452087 864 ntTSL 321.23■□□□□ 0.991e-7■■■■■ 60.3
DKC1O60832 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.371e-7■■■■■ 60.3
DKC1O60832 NUCB1-211ENST00000485798 938 ntTSL 317.04■□□□□ 0.321e-7■■■■■ 60.3
DKC1O60832 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.081e-7■■■■■ 60.3
DKC1O60832 TRAF7-206ENST00000569686 586 ntTSL 229.03■■■□□ 2.245e-8■■■■■ 60.3
DKC1O60832 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.78■■□□□ 1.725e-8■■■■■ 60.3
DKC1O60832 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.85■□□□□ 0.775e-8■■■■■ 60.3
DKC1O60832 TRAF7-202ENST00000564067 874 ntTSL 319.77■□□□□ 0.765e-8■■■■■ 60.3
DKC1O60832 TRAF7-204ENST00000567645 737 ntTSL 516.37■□□□□ 0.215e-8■■■■■ 60.3
DKC1O60832 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.135e-8■■■■■ 60.3
DKC1O60832 SNORD111B-201ENST00000408587 80 ntBASIC-4.75□□□□□ -3.176e-23■■■■■ 60.3
DKC1O60832 LIMS1-208ENST00000428064 637 ntTSL 223.57■■□□□ 1.362e-13■■■■■ 60.1
DKC1O60832 PSMD12-205ENST00000579365 560 ntTSL 422.6■■□□□ 1.212e-13■■■■■ 60.1
DKC1O60832 EXD3-211ENST00000490886 1123 ntTSL 521.28■■□□□ 16e-11■■■■■ 60.1
DKC1O60832 PSMD12-208ENST00000584289 1090 ntTSL 1 (best)20.54■□□□□ 0.882e-13■■■■■ 60.1
DKC1O60832 PSMD12-206ENST00000581618 613 ntTSL 420.52■□□□□ 0.882e-13■■■■■ 60.1
DKC1O60832 PSMD12-207ENST00000584008 1752 ntTSL 1 (best)20.5■□□□□ 0.872e-13■■■■■ 60.1
DKC1O60832 EXD3-212ENST00000491734 2176 ntTSL 1 (best)19.39■□□□□ 0.696e-11■■■■■ 60.1
DKC1O60832 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.44■□□□□ 0.542e-13■■■■■ 60.1
DKC1O60832 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.446e-11■■■■■ 60.1
DKC1O60832 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.322e-13■■■■■ 60.1
DKC1O60832 EXD3-206ENST00000478344 2932 ntTSL 215.44■□□□□ 0.066e-11■■■■■ 60.1
DKC1O60832 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.022e-13■■■■■ 60.1
DKC1O60832 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.152e-13■■■■■ 60.1
DKC1O60832 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC14.18□□□□□ -0.141e-7■■■■■ 59.8
DKC1O60832 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.88■□□□□ 0.455e-7■■■■■ 59.8
DKC1O60832 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.9□□□□□ -0.185e-7■■■■■ 59.8
DKC1O60832 AC006001.2-203ENST00000428557 304 ntTSL 313.28□□□□□ -0.285e-7■■■■■ 59.8
DKC1O60832 SNORD101-201ENST00000384027 73 ntBASIC-0.82□□□□□ -2.541e-323■■■■■ 59.7
DKC1O60832 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC11.27□□□□□ -0.611e-9■■■■■ 59.5
DKC1O60832 RPL32P3-204ENST00000507238 363 ntTSL 310.8□□□□□ -0.681e-9■■■■■ 59.5
DKC1O60832 SPON2-204ENST00000502483 571 ntTSL 427.82■■■□□ 2.044e-7■■■■■ 59.4
DKC1O60832 SPON2-207ENST00000504871 581 ntTSL 427.65■■■□□ 2.024e-7■■■■■ 59.4
DKC1O60832 SPON2-220ENST00000515004 571 ntTSL 425.02■■□□□ 1.64e-7■■■■■ 59.4
DKC1O60832 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.574e-7■■■■■ 59.4
DKC1O60832 SPON2-212ENST00000509233 549 ntTSL 421.52■■□□□ 1.044e-7■■■■■ 59.4
DKC1O60832 SPON2-215ENST00000511672 557 ntTSL 419.23■□□□□ 0.674e-7■■■■■ 59.4
DKC1O60832 SPON2-216ENST00000511679 556 ntTSL 517.24■□□□□ 0.354e-7■■■■■ 59.4
DKC1O60832 SPON2-210ENST00000506266 462 ntTSL 414.55□□□□□ -0.084e-7■■■■■ 59.4
DKC1O60832 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.62■□□□□ 0.257e-7■■■■■ 59.3
DKC1O60832 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.257e-7■■■■■ 59.3
DKC1O60832 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.237e-7■■■■■ 59.3
DKC1O60832 PTS-209ENST00000531673 986 ntTSL 1 (best)15.67■□□□□ 0.12e-7■■■■■ 59.1
DKC1O60832 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)20.25■□□□□ 0.833e-25■■■■■ 59
DKC1O60832 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.183e-25■■■■■ 59
DKC1O60832 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.213e-25■■■■■ 59
DKC1O60832 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.237e-7■■■■■ 58.9
DKC1O60832 GLDC-210ENST00000639020 401 ntTSL 319.6■□□□□ 0.731e-6■■■■■ 58.7
DKC1O60832 GLDC-217ENST00000639840 600 ntTSL 518.7■□□□□ 0.581e-6■■■■■ 58.7
DKC1O60832 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.431e-6■■■■■ 58.7
DKC1O60832 GLDC-221ENST00000640592 2828 ntTSL 58.34□□□□□ -1.071e-6■■■■■ 58.7
DKC1O60832 GLDC-212ENST00000639364 3298 ntTSL 58.31□□□□□ -1.081e-6■■■■■ 58.7
DKC1O60832 GLDC-218ENST00000639954 3279 ntTSL 57.62□□□□□ -1.191e-6■■■■■ 58.7
DKC1O60832 AATK-202ENST00000374792 4938 ntTSL 221.77■■□□□ 1.089e-8■■■■■ 58.6
DKC1O60832 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.639e-8■■■■■ 58.6
DKC1O60832 AATK-206ENST00000572798 407 ntTSL 214.42□□□□□ -0.19e-8■■■■■ 58.6
DKC1O60832 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.65■□□□□ 0.581e-323■■■■■ 58.4
DKC1O60832 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.82e-7■■■■■ 58.4
DKC1O60832 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.052e-23■■■■■ 58.3
DKC1O60832 CDR2-207ENST00000569045 826 ntTSL 518.7■□□□□ 0.581e-7■■■■■ 58.2
DKC1O60832 CDR2-204ENST00000564542 1056 ntTSL 515.78■□□□□ 0.121e-7■■■■■ 58.2
DKC1O60832 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.17■□□□□ 0.021e-7■■■■■ 58.2
DKC1O60832 CDR2-203ENST00000563573 556 ntTSL 45.13□□□□□ -1.591e-7■■■■■ 58.2
DKC1O60832 SNORA80C-201ENST00000362917 135 ntBASIC11.25□□□□□ -0.615e-75■■■■■ 58.1
DKC1O60832 TMEM167A-204ENST00000509770 492 ntTSL 416.95■□□□□ 0.31e-323■■■■■ 57.9
DKC1O60832 TMEM167A-203ENST00000504622 596 ntTSL 214.23□□□□□ -0.131e-323■■■■■ 57.9
Retrieved 100 of 8,567 protein–RNA pairs in 1657.5 ms