RNA–Protein interactions for RNA: ENST00000428557.1

AC006001.2-203, humanhuman

TSL 3

Gene AC006001.2, Length 304 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-203ENST00000428557 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
AC006001.2-203ENST00000428557 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
AC006001.2-203ENST00000428557 ABCC9O60706 1549 aa25.56■■□□□ 1.68
AC006001.2-203ENST00000428557 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
AC006001.2-203ENST00000428557 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
AC006001.2-203ENST00000428557 NACADO15069 1562 aa24.25■■□□□ 1.47
AC006001.2-203ENST00000428557 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
AC006001.2-203ENST00000428557 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
AC006001.2-203ENST00000428557 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
AC006001.2-203ENST00000428557 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
AC006001.2-203ENST00000428557 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
AC006001.2-203ENST00000428557 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
AC006001.2-203ENST00000428557 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
AC006001.2-203ENST00000428557 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
AC006001.2-203ENST00000428557 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
AC006001.2-203ENST00000428557 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
AC006001.2-203ENST00000428557 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
AC006001.2-203ENST00000428557 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
AC006001.2-203ENST00000428557 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
AC006001.2-203ENST00000428557 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
AC006001.2-203ENST00000428557 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
AC006001.2-203ENST00000428557 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
AC006001.2-203ENST00000428557 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
AC006001.2-203ENST00000428557 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
AC006001.2-203ENST00000428557 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
AC006001.2-203ENST00000428557 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
AC006001.2-203ENST00000428557 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
AC006001.2-203ENST00000428557 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
AC006001.2-203ENST00000428557 NESP48681 1621 aa22.02■■□□□ 1.11
AC006001.2-203ENST00000428557 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
AC006001.2-203ENST00000428557 WIZO95785 1651 aa21.97■■□□□ 1.11
AC006001.2-203ENST00000428557 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
AC006001.2-203ENST00000428557 CUX2O14529 1486 aa21.82■■□□□ 1.08
AC006001.2-203ENST00000428557 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
AC006001.2-203ENST00000428557 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
AC006001.2-203ENST00000428557 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
AC006001.2-203ENST00000428557 CFTRP13569 1480 aa21.61■■□□□ 1.05
AC006001.2-203ENST00000428557 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
AC006001.2-203ENST00000428557 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
AC006001.2-203ENST00000428557 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
AC006001.2-203ENST00000428557 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
AC006001.2-203ENST00000428557 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
AC006001.2-203ENST00000428557 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
AC006001.2-203ENST00000428557 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
AC006001.2-203ENST00000428557 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
AC006001.2-203ENST00000428557 WDR62O43379 1518 aa21.42■■□□□ 1.02
AC006001.2-203ENST00000428557 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
AC006001.2-203ENST00000428557 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
AC006001.2-203ENST00000428557 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
AC006001.2-203ENST00000428557 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
AC006001.2-203ENST00000428557 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
AC006001.2-203ENST00000428557 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
AC006001.2-203ENST00000428557 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
AC006001.2-203ENST00000428557 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
AC006001.2-203ENST00000428557 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
AC006001.2-203ENST00000428557 SOGA1O94964 1423 aa20.95■□□□□ 0.95
AC006001.2-203ENST00000428557 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
AC006001.2-203ENST00000428557 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
AC006001.2-203ENST00000428557 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
AC006001.2-203ENST00000428557 CUX1P39880 1505 aa20.9■□□□□ 0.94
AC006001.2-203ENST00000428557 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
AC006001.2-203ENST00000428557 FBLN2P98095 1184 aa20.87■□□□□ 0.93
AC006001.2-203ENST00000428557 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
AC006001.2-203ENST00000428557 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
AC006001.2-203ENST00000428557 EIF4G3O43432 1585 aaKnown RBP20.84■□□□□ 0.93
AC006001.2-203ENST00000428557 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AC006001.2-203ENST00000428557 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
AC006001.2-203ENST00000428557 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
AC006001.2-203ENST00000428557 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
AC006001.2-203ENST00000428557 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
AC006001.2-203ENST00000428557 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
AC006001.2-203ENST00000428557 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
AC006001.2-203ENST00000428557 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
AC006001.2-203ENST00000428557 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
AC006001.2-203ENST00000428557 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
AC006001.2-203ENST00000428557 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
AC006001.2-203ENST00000428557 CHD1O14646 1710 aa20.56■□□□□ 0.88
AC006001.2-203ENST00000428557 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
AC006001.2-203ENST00000428557 CYB5RLQ6IPT4 315 aa20.55■□□□□ 0.88
AC006001.2-203ENST00000428557 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
AC006001.2-203ENST00000428557 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
AC006001.2-203ENST00000428557 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
AC006001.2-203ENST00000428557 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
AC006001.2-203ENST00000428557 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
AC006001.2-203ENST00000428557 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
AC006001.2-203ENST00000428557 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
AC006001.2-203ENST00000428557 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
AC006001.2-203ENST00000428557 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
AC006001.2-203ENST00000428557 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
AC006001.2-203ENST00000428557 NUP160Q12769 1436 aa20.32■□□□□ 0.84
AC006001.2-203ENST00000428557 IGF1RP08069 1367 aa20.32■□□□□ 0.84
AC006001.2-203ENST00000428557 CEP170Q5SW79 1584 aa20.26■□□□□ 0.83
AC006001.2-203ENST00000428557 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
AC006001.2-203ENST00000428557 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
AC006001.2-203ENST00000428557 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
AC006001.2-203ENST00000428557 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
AC006001.2-203ENST00000428557 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms