RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
CHD8-206ENST00000553870 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CHD8-206ENST00000553870 ABCC9O60706 1549 aa19.43■□□□□ 0.7
CHD8-206ENST00000553870 NACADO15069 1562 aa18.79■□□□□ 0.6
CHD8-206ENST00000553870 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
CHD8-206ENST00000553870 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
CHD8-206ENST00000553870 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
CHD8-206ENST00000553870 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
CHD8-206ENST00000553870 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
CHD8-206ENST00000553870 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
CHD8-206ENST00000553870 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
CHD8-206ENST00000553870 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHD8-206ENST00000553870 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
CHD8-206ENST00000553870 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
CHD8-206ENST00000553870 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
CHD8-206ENST00000553870 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
CHD8-206ENST00000553870 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
CHD8-206ENST00000553870 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.41
CHD8-206ENST00000553870 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
CHD8-206ENST00000553870 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
CHD8-206ENST00000553870 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
CHD8-206ENST00000553870 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
CHD8-206ENST00000553870 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
CHD8-206ENST00000553870 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
CHD8-206ENST00000553870 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
CHD8-206ENST00000553870 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
CHD8-206ENST00000553870 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
CHD8-206ENST00000553870 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
CHD8-206ENST00000553870 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
CHD8-206ENST00000553870 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
CHD8-206ENST00000553870 WIZO95785 1651 aa17.07■□□□□ 0.32
CHD8-206ENST00000553870 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
CHD8-206ENST00000553870 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
CHD8-206ENST00000553870 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
CHD8-206ENST00000553870 NESP48681 1621 aa16.81■□□□□ 0.28
CHD8-206ENST00000553870 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
CHD8-206ENST00000553870 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
CHD8-206ENST00000553870 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
CHD8-206ENST00000553870 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
CHD8-206ENST00000553870 CFTRP13569 1480 aa16.74■□□□□ 0.27
CHD8-206ENST00000553870 CUX2O14529 1486 aa16.62■□□□□ 0.25
CHD8-206ENST00000553870 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
CHD8-206ENST00000553870 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
CHD8-206ENST00000553870 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
CHD8-206ENST00000553870 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
CHD8-206ENST00000553870 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
CHD8-206ENST00000553870 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
CHD8-206ENST00000553870 WDR62O43379 1518 aa16.48■□□□□ 0.23
CHD8-206ENST00000553870 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
CHD8-206ENST00000553870 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
CHD8-206ENST00000553870 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
CHD8-206ENST00000553870 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
CHD8-206ENST00000553870 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
CHD8-206ENST00000553870 CUX1P39880 1505 aa16.21■□□□□ 0.19
CHD8-206ENST00000553870 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
CHD8-206ENST00000553870 SOGA1O94964 1423 aa16.19■□□□□ 0.18
CHD8-206ENST00000553870 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CHD8-206ENST00000553870 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
CHD8-206ENST00000553870 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
CHD8-206ENST00000553870 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
CHD8-206ENST00000553870 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
CHD8-206ENST00000553870 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
CHD8-206ENST00000553870 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
CHD8-206ENST00000553870 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
CHD8-206ENST00000553870 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
CHD8-206ENST00000553870 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.167e-8■■■■■ 32.6
CHD8-206ENST00000553870 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
CHD8-206ENST00000553870 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
CHD8-206ENST00000553870 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
CHD8-206ENST00000553870 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
CHD8-206ENST00000553870 OSCARQ8IYS5 282 aa16■□□□□ 0.15
CHD8-206ENST00000553870 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
CHD8-206ENST00000553870 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
CHD8-206ENST00000553870 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
CHD8-206ENST00000553870 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
CHD8-206ENST00000553870 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
CHD8-206ENST00000553870 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
CHD8-206ENST00000553870 FBLN2P98095 1184 aa15.89■□□□□ 0.13
CHD8-206ENST00000553870 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
CHD8-206ENST00000553870 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
CHD8-206ENST00000553870 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
CHD8-206ENST00000553870 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
CHD8-206ENST00000553870 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
CHD8-206ENST00000553870 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
CHD8-206ENST00000553870 IGF1RP08069 1367 aa15.8■□□□□ 0.12
CHD8-206ENST00000553870 CHD1O14646 1710 aa15.8■□□□□ 0.12
CHD8-206ENST00000553870 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
CHD8-206ENST00000553870 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
CHD8-206ENST00000553870 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
CHD8-206ENST00000553870 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
CHD8-206ENST00000553870 NUP160Q12769 1436 aa15.69■□□□□ 0.1
CHD8-206ENST00000553870 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
CHD8-206ENST00000553870 CUL7Q14999 1698 aa15.69■□□□□ 0.1
CHD8-206ENST00000553870 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
CHD8-206ENST00000553870 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
CHD8-206ENST00000553870 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
CHD8-206ENST00000553870 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
CHD8-206ENST00000553870 EEA1Q15075 1411 aa15.61■□□□□ 0.09
CHD8-206ENST00000553870 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
CHD8-206ENST00000553870 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms